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MeSHDbi

DBI to construct MeSH-related package from sqlite file


Bioconductor version: Release (3.18)

The package is unified implementation of MeSH.db, MeSH.AOR.db, and MeSH.PCR.db and also is interface to construct Gene-MeSH package (MeSH.XXX.eg.db). loadMeSHDbiPkg import sqlite file and generate MeSH.XXX.eg.db.

Author: Koki Tsuyuzaki

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("MeSHDbi")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MeSHDbi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MeSHDbi")
MeSH.db PDF
Reference Manual PDF
NEWS Text

Details

biocViews Annotation, AnnotationData, Infrastructure, Software
Version 1.38.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License Artistic-2.0
Depends R (>= 3.0.1)
Imports methods, AnnotationDbi(>= 1.31.19), RSQLite, Biobase
System Requirements
URL
See More
Suggests testthat
Linking To
Enhances
Depends On Me
Imports Me meshes, meshr, scTensor
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MeSHDbi_1.38.0.tar.gz
Windows Binary MeSHDbi_1.38.0.zip
macOS Binary (x86_64) MeSHDbi_1.38.0.tgz
macOS Binary (arm64) MeSHDbi_1.38.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MeSHDbi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MeSHDbi
Bioc Package Browser https://code.bioconductor.org/browse/MeSHDbi/
Package Short Url https://bioconductor.org/packages/MeSHDbi/
Package Downloads Report Download Stats