To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("ConnectivityMap")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.4)
The Broad Institute's Connectivity Map (cmap02) is a "large reference catalogue of gene-expression data from cultured human cells perturbed with many chemicals and genetic reagents", containing more than 7000 gene expression profiles and 1300 small molecules.
Author: Paul Shannon
Maintainer: Paul Shannon<pshannon at systemsbiology.org>
Citation (from within R,
enter citation("ConnectivityMap")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("ConnectivityMap")
Reference Manual |
biocViews | CancerData, ExperimentData, MicroarrayData |
Version | 1.10.0 |
License | GPL-3 |
Depends | R (>= 2.15.1) |
Imports | |
LinkingTo | |
Suggests | RUnit, BiocGenerics |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | ConnectivityMap_1.10.0.tar.gz |
Windows Binary | |
Mac OS X 10.9 (Mavericks) | |
Subversion source | (username/password: readonly) |
Package Short Url | http://bioconductor.org/packages/ConnectivityMap/ |
Package Downloads Report | Download Stats |
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