rmelting

This is the development version of rmelting; for the stable release version, see rmelting.

R Interface to MELTING 5

Bioconductor version: Development (3.21)

R interface to the MELTING 5 program (https://www.ebi.ac.uk/biomodels/tools/melting/) to compute melting temperatures of nucleic acid duplexes along with other thermodynamic parameters.

Author: J. Aravind [aut, cre] (ORCID: ), G. K. Krishna [aut], Bob Rudis [ctb] (melting5jars), Nicolas Le Novère [ctb] (MELTING 5 Java Library), Marine Dumousseau [ctb] (MELTING 5 Java Library), William John Gowers [ctb] (MELTING 5 Java Library)

Maintainer: J. Aravind <j.aravind at icar.gov.in>

Citation (from within R, enter citation("rmelting")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("rmelting")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rmelting")

Tutorial	PDF
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	BiomedicalInformatics, Cheminformatics, Software
Version	1.23.0
In Bioconductor since	BioC 3.9 (R-3.6) (5.5 years)
License	GPL-2 \| GPL-3
Depends	R (>= 3.6)
Imports	Rdpack, rJava (>= 0.9-8)
System Requirements	Java
URL	https://github.com/aravind-j/rmelting https://aravind-j.github.io/rmelting/
Bug Reports	https://github.com/aravind-j/rmelting/issues

Suggests	readxl, knitr, rmarkdown, reshape2, pander, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	rmelting_1.23.0.tar.gz
Windows Binary (x86_64)	rmelting_1.23.0.zip (64-bit only)
macOS Binary (x86_64)	rmelting_1.23.0.tgz
macOS Binary (arm64)	rmelting_1.23.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/rmelting
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/rmelting
Bioc Package Browser	https://code.bioconductor.org/browse/rmelting/
Package Short Url	https://bioconductor.org/packages/rmelting/
Package Downloads Report	Download Stats