rSWeeP
This is the development version of rSWeeP; for the stable release version, see rSWeeP.
Spaced Words Projection (SWeeP)
Bioconductor version: Development (3.21)
"Spaced Words Projection (SWeeP)" is a method for representing biological sequences using vectors preserving inter-sequence comparability.
Author: Camila Pereira Perico [com, cre, aut, cph] (ORCID:
Maintainer: Camila P Perico <camilapp94 at gmail.com>
citation("rSWeeP")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("rSWeeP")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rSWeeP")| rSWeeP | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Software |
| Version | 1.19.0 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4.5 years) |
| License | GPL (>= 2) |
| Depends | foreach, doParallel, parallel, Biostrings, methods, utils |
| Imports | tools, stringi |
| System Requirements | |
| URL |
See More
| Suggests | Rtsne, ape, Seurat, knitr, rmarkdown, tictoc, BiocStyle, testthat (>= 3.0.0) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | rSWeeP_1.19.0.tar.gz |
| Windows Binary (x86_64) | rSWeeP_1.19.0.zip (64-bit only) |
| macOS Binary (x86_64) | rSWeeP_1.19.0.tgz |
| macOS Binary (arm64) | rSWeeP_1.19.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/rSWeeP |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rSWeeP |
| Bioc Package Browser | https://code.bioconductor.org/browse/rSWeeP/ |
| Package Short Url | https://bioconductor.org/packages/rSWeeP/ |
| Package Downloads Report | Download Stats |