rSWeeP
This is the development version of rSWeeP; for the stable release version, see rSWeeP.
Spaced Words Projection (SWeeP)
Bioconductor version: Development (3.20)
"Spaced Words Projection (SWeeP)" is a method for representing biological sequences using vectors preserving inter-sequence comparability.
Author: Camila Pereira Perico [com, cre, aut, cph] , Danrley Rafael Fernandes [aut], Mariane Gonçalves Kulik [aut]
, Júlia Formighieri Varaschin [aut], Camilla Reginatto de Pierri [aut]
, Ricardo Assunção Vialle [aut]
, Roberto Tadeu Raittz [aut, cph]
Maintainer: Camila P Perico <camilapp94 at gmail.com>
citation("rSWeeP")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("rSWeeP")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rSWeeP")
rSWeeP | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Software |
Version | 1.17.2 |
In Bioconductor since | BioC 3.11 (R-4.0) (4.5 years) |
License | GPL (>= 2) |
Depends | foreach, doParallel, parallel, Biostrings, methods, utils |
Imports | tools, stringi |
System Requirements | |
URL |
See More
Suggests | Rtsne, ape, Seurat, knitr, rmarkdown, tictoc, BiocStyle, testthat (>= 3.0.0) |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | rSWeeP_1.17.2.tar.gz |
Windows Binary | rSWeeP_1.17.2.zip |
macOS Binary (x86_64) | rSWeeP_1.17.2.tgz |
macOS Binary (arm64) | rSWeeP_1.17.2.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/rSWeeP |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rSWeeP |
Bioc Package Browser | https://code.bioconductor.org/browse/rSWeeP/ |
Package Short Url | https://bioconductor.org/packages/rSWeeP/ |
Package Downloads Report | Download Stats |