NTW
Predict gene network using an Ordinary Differential Equation (ODE) based method
Bioconductor version: Release (3.19)
This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.
Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini
Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>
Citation (from within R, enter
citation("NTW")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("NTW")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("NTW")
NTW vignette | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Preprocessing, Software |
Version | 1.54.0 |
In Bioconductor since | BioC 2.7 (R-2.12) (14 years) |
License | GPL-2 |
Depends | R (>= 2.3.0) |
Imports | mvtnorm, stats, utils |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
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Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | NTW_1.54.0.tar.gz |
Windows Binary | NTW_1.54.0.zip |
macOS Binary (x86_64) | NTW_1.54.0.tgz |
macOS Binary (arm64) | NTW_1.54.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/NTW |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/NTW |
Bioc Package Browser | https://code.bioconductor.org/browse/NTW/ |
Package Short Url | https://bioconductor.org/packages/NTW/ |
Package Downloads Report | Download Stats |