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Assessing array quality on spotted arrays

Bioconductor version: Release (3.18)

Functions for performing print-run and array level quality assessment.

Author: Agnes Paquet and Jean Yee Hwa Yang <yeehwa at stat.berkeley.edu>

Maintainer: Agnes Paquet <paquetagnes at yahoo.com>

Citation (from within R, enter citation("arrayQuality")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews Microarray, QualityControl, Software, TwoChannel, Visualization
Version 1.80.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)
License LGPL
Depends R (>= 2.2.0)
Imports graphics, grDevices, grid, gridBase, hexbin, limma, marray, methods, RColorBrewer, stats, utils
System Requirements
URL http://arrays.ucsf.edu/
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Suggests mclust, MEEBOdata, HEEBOdata
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package arrayQuality_1.80.0.tar.gz
Windows Binary arrayQuality_1.80.0.zip
macOS Binary (x86_64) arrayQuality_1.80.0.tgz
macOS Binary (arm64) arrayQuality_1.80.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/arrayQuality
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/arrayQuality
Bioc Package Browser https://code.bioconductor.org/browse/arrayQuality/
Package Short Url https://bioconductor.org/packages/arrayQuality/
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