This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.18 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SISPA.

SISPA: Method for Sample Integrated Set Profile Analysis

Bioconductor version: 3.18

Sample Integrated Set Profile Analysis (SISPA) is a method designed to define sample groups with similar gene set enrichment profiles.

Author: Bhakti Dwivedi and Jeanne Kowalski

Maintainer: Bhakti Dwivedi <bhakti.dwivedi at>

Citation (from within R, enter citation("SISPA")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews GeneSetEnrichment, GenomeWideAssociation, Software
Version 1.32.0
In Bioconductor since BioC 3.2 (R-3.2) (8.5 years)
License GPL-2
Depends R (>= 3.5), genefilter, GSVA, changepoint
Imports data.table, plyr, ggplot2
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Follow Installation instructions to use this package in your R session.

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