This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see Rcpi.

Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery

Bioconductor version: 3.18

A molecular informatics toolkit with an integration of bioinformatics and chemoinformatics tools for drug discovery.

Author: Nan Xiao [aut, cre], Dong-Sheng Cao [aut], Qing-Song Xu [aut]

Maintainer: Nan Xiao <me at nanx.me>

Citation (from within R, enter citation("Rcpi")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Rcpi Quick Reference Card HTML
Rcpi: R/Bioconductor Package as an Integrated Informatics Platform for Drug Discovery HTML R Script
Reference Manual PDF


biocViews BiomedicalInformatics, Cheminformatics, DataImport, DataRepresentation, FeatureExtraction, GO, Proteomics, Software, SystemsBiology
Version 1.38.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License Artistic-2.0 | file LICENSE
Depends R (>= 3.0.2)
Imports Biostrings, GOSemSim, RCurl, doParallel, foreach, methods, rjson, rlang, stats, utils
System Requirements
URL https://nanx.me/Rcpi/ https://github.com/nanxstats/Rcpi
Bug Reports https://github.com/nanxstats/Rcpi/issues
See More
Suggests knitr, rmarkdown, testthat (>= 3.0.0)
Linking To
Depends On Me
Imports Me proteasy
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcpi_1.38.0.tar.gz
Windows Binary Rcpi_1.38.0.zip
macOS Binary (x86_64) Rcpi_1.38.0.tgz
macOS Binary (arm64) Rcpi_1.38.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rcpi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rcpi
Bioc Package Browser https://code.bioconductor.org/browse/Rcpi/
Package Short Url https://bioconductor.org/packages/Rcpi/
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