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This is the development version of tidybulk; for the stable release version, see tidybulk.
Bioconductor version: Development (3.17)
This is a collection of utility functions that allow to perform exploration of and calculations to RNA sequencing data, in a modular, pipe-friendly and tidy fashion.
Author: Stefano Mangiola [aut, cre], Maria Doyle [ctb]
Maintainer: Stefano Mangiola <mangiolastefano at gmail.com>
Citation (from within R,
enter citation("tidybulk")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") # The following initializes usage of Bioc devel BiocManager::install(version='devel') BiocManager::install("tidybulk")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tidybulk")
HTML | R Script | Comparison with base R |
HTML | R Script | Manuscript code - differential feature abundance |
HTML | R Script | Manuscript code - transcriptional signature identification |
HTML | R Script | Overview of the tidybulk package |
Reference Manual |
Follow Installation instructions to use this package in your R session.
Source Package | tidybulk_1.11.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/tidybulk |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/tidybulk |
Package Short Url | https://bioconductor.org/packages/tidybulk/ |
Package Downloads Report | Download Stats |
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