DOI: 10.18129/B9.bioc.EnrichedHeatmap    

This is the development version of EnrichedHeatmap; for the stable release version, see EnrichedHeatmap.

Making Enriched Heatmaps

Bioconductor version: Development (3.17)

Enriched heatmap is a special type of heatmap which visualizes the enrichment of genomic signals on specific target regions. Here we implement enriched heatmap by ComplexHeatmap package. Since this type of heatmap is just a normal heatmap but with some special settings, with the functionality of ComplexHeatmap, it would be much easier to customize the heatmap as well as concatenating to a list of heatmaps to show correspondance between different data sources.

Author: Zuguang Gu [aut, cre]

Maintainer: Zuguang Gu <z.gu at dkfz.de>

Citation (from within R, enter citation("EnrichedHeatmap")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


PDF   Reference Manual


biocViews Coverage, GenomeAnnotation, Sequencing, Software, Visualization
Version 1.29.0
In Bioconductor since BioC 3.2 (R-3.2) (7 years)
License MIT + file LICENSE
Depends R (>= 3.6.0), methods, grid, ComplexHeatmap(>= 2.11.0), GenomicRanges
Imports matrixStats, stats, GetoptLong, Rcpp, utils, locfit, circlize (>= 0.4.5), IRanges
LinkingTo Rcpp
Suggests testthat (>= 0.3), knitr, markdown, rmarkdown, genefilter, RColorBrewer
URL https://github.com/jokergoo/EnrichedHeatmap
Depends On Me
Imports Me extraChIPs, profileplyr
Suggests Me ComplexHeatmap, epistack, InteractiveComplexHeatmap
Links To Me
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Follow Installation instructions to use this package in your R session.

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Source Repository git clone https://git.bioconductor.org/packages/EnrichedHeatmap
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EnrichedHeatmap
Package Short Url https://bioconductor.org/packages/EnrichedHeatmap/
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