DOI: 10.18129/B9.bioc.mumosa  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see mumosa.

Multi-Modal Single-Cell Analysis Methods

Bioconductor version: 3.16

Assorted utilities for multi-modal analyses of single-cell datasets. Includes functions to combine multiple modalities for downstream analysis, perform MNN-based batch correction across multiple modalities, and to compute correlations between assay values for different modalities.

Author: Aaron Lun [aut, cre]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at>

Citation (from within R, enter citation("mumosa")):


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biocViews ImmunoOncology, RNASeq, SingleCell, Software
Version 1.6.0
In Bioconductor since BioC 3.13 (R-4.1) (2 years)
License GPL-3
Depends SingleCellExperiment
Imports stats, utils, methods, igraph, Matrix, BiocGenerics, BiocParallel, IRanges, S4Vectors, DelayedArray, DelayedMatrixStats, SummarizedExperiment, BiocNeighbors, BiocSingular, ScaledMatrix, beachmat, scuttle, metapod, scran, batchelor, uwot
Suggests testthat, knitr, BiocStyle, rmarkdown, scater, bluster, DropletUtils, scRNAseq
Depends On Me OSCA.advanced
Imports Me
Suggests Me
Links To Me
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