DOI: 10.18129/B9.bioc.dagLogo  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see dagLogo.

dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory

Bioconductor version: 3.16

Visualize significant conserved amino acid sequence pattern in groups based on probability theory.

Author: Jianhong Ou, Haibo Liu, Alexey Stukalov, Niraj Nirala, Usha Acharya, Lihua Julie Zhu

Maintainer: Jianhong Ou <jianhong.ou at duke.edu>

Citation (from within R, enter citation("dagLogo")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script dagLogo Vignette
PDF   Reference Manual
Text   NEWS


biocViews SequenceMatching, Software, Visualization
Version 1.36.0
In Bioconductor since BioC 2.13 (R-3.0) (9.5 years)
License GPL (>=2)
Depends R (>= 3.0.1), methods, grid
Imports pheatmap, Biostrings, UniProt.ws, BiocGenerics, utils, biomaRt, motifStack, httr
Suggests XML, grImport, grImport2, BiocStyle, knitr, rmarkdown, testthat
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package dagLogo_1.36.0.tar.gz
Windows Binary dagLogo_1.36.0.zip
macOS Binary (x86_64) dagLogo_1.36.0.tgz
macOS Binary (arm64) dagLogo_1.36.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/dagLogo
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/dagLogo
Bioc Package Browser https://code.bioconductor.org/browse/dagLogo/
Package Short Url https://bioconductor.org/packages/dagLogo/
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: