DOI: 10.18129/B9.bioc.UniProt.ws  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see UniProt.ws.

R Interface to UniProt Web Services

Bioconductor version: 3.16

The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. This package provides a collection of functions for retrieving, processing, and re-packaging UniProt web services. The package makes use of UniProt's modernized REST API and allows mapping of identifiers accross different databases.

Author: Marc Carlson [aut], Csaba Ortutay [ctb], Marcel Ramos [aut, cre]

Maintainer: Marcel Ramos <marcel.ramos at roswellpark.org>

Citation (from within R, enter citation("UniProt.ws")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


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PDF R Script UniProt.ws: A package for retrieving data from the UniProt web service
PDF   Reference Manual
Text   NEWS


biocViews Annotation, BioCarta, GO, Infrastructure, KEGG, Software
Version 2.38.1
In Bioconductor since BioC 2.12 (R-3.0) (10 years)
License Artistic-2.0
Depends methods, utils, RSQLite, BiocGenerics(>= 0.13.8)
Imports AnnotationDbi, BiocFileCache, BiocBaseUtils, rjsoncons, jsonlite, httr, httpcache, progress
Suggests RUnit, BiocStyle, knitr
Depends On Me
Imports Me dagLogo, drugTargetInteractions
Suggests Me cleaver, qPLEXanalyzer
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package UniProt.ws_2.38.1.tar.gz
Windows Binary UniProt.ws_2.38.1.zip
macOS Binary (x86_64) UniProt.ws_2.38.1.tgz
macOS Binary (arm64) UniProt.ws_2.38.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/UniProt.ws
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/UniProt.ws
Bioc Package Browser https://code.bioconductor.org/browse/UniProt.ws/
Package Short Url https://bioconductor.org/packages/UniProt.ws/
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