DOI: 10.18129/B9.bioc.TransView  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see TransView.

Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets

Bioconductor version: 3.16

This package provides efficient tools to generate, access and display read densities of sequencing based data sets such as from RNA-Seq and ChIP-Seq.

Author: Julius Muller

Maintainer: Julius Muller <ju-mu at>

Citation (from within R, enter citation("TransView")):


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PDF R Script An introduction to TransView
PDF   Reference Manual
Text   NEWS


biocViews ChIPSeq, Clustering, DNAMethylation, DataImport, GeneExpression, ImmunoOncology, MethylSeq, Microarray, MultipleComparison, RNASeq, Sequencing, Software, Transcription, Visualization
Version 1.42.0
In Bioconductor since BioC 2.11 (R-2.15) (10.5 years)
License GPL-3
Depends methods, GenomicRanges
Imports BiocGenerics, S4Vectors(>= 0.9.25), IRanges, zlibbioc, gplots
LinkingTo Rhtslib(>= 1.99.1)
Suggests RUnit, pasillaBamSubset, BiocManager
SystemRequirements GNU make
Depends On Me
Imports Me
Suggests Me
Links To Me
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