BeadArrayUseCases

DOI: 10.18129/B9.bioc.BeadArrayUseCases    

Analysing Illumina BeadArray expression data using Bioconductor

Bioconductor version: Release (3.13)

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("BeadArrayUseCases")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BeadArrayUseCases")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadArrayUseCases")

 

PDF R Script BeadArrayUseCases.pdf
PDF   Reference Manual

Details

biocViews ExperimentData, MicroarrayData
Version 1.30.1
License GPL-2
Depends
Imports beadarray(>= 2.3.18), limma, GEOquery
LinkingTo
Suggests Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BeadArrayUseCases_1.30.1.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/BeadArrayUseCases
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BeadArrayUseCases
Package Short Url https://bioconductor.org/packages/BeadArrayUseCases/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: