Mirsynergy

DOI: 10.18129/B9.bioc.Mirsynergy    

Mirsynergy

Bioconductor version: Release (3.11)

Detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion.

Author: Yue Li

Maintainer: Yue Li <yueli at cs.toronto.edu>

Citation (from within R, enter citation("Mirsynergy")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Mirsynergy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Mirsynergy")

 

PDF R Script Mirsynergy
PDF   Reference Manual
Text   NEWS

Details

biocViews Clustering, Software
Version 1.23.0
In Bioconductor since BioC 2.14 (R-3.1) (6.5 years)
License GPL-2
Depends R (>= 3.0.2), igraph, ggplot2
Imports graphics, grDevices, gridExtra, Matrix, parallel, RColorBrewer, reshape, scales, utils
LinkingTo
Suggests glmnet, RUnit, BiocGenerics, knitr
SystemRequirements
Enhances
URL http://www.cs.utoronto.ca/~yueli/Mirsynergy.html
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Mirsynergy_1.23.0.tar.gz
Windows Binary Mirsynergy_1.23.0.zip
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/Mirsynergy
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Mirsynergy
Package Short Url https://bioconductor.org/packages/Mirsynergy/
Package Downloads Report Download Stats

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