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This page was generated on 2023-04-20 12:50:31 -0400 (Thu, 20 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_64R Under development (unstable) (2023-04-19 r84288) -- "Unsuffered Consequences" 3941
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for metavizr on nebbiolo2


To the developers/maintainers of the metavizr package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metavizr.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1183/2223HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metavizr 1.23.1  (landing page)
Hector Corrada Bravo
Snapshot Date: 2023-04-19 23:55:56 -0400 (Wed, 19 Apr 2023)
git_url: https://git.bioconductor.org/packages/metavizr
git_branch: devel
git_last_commit: 752b55c
git_last_commit_date: 2023-03-30 12:44:06 -0400 (Thu, 30 Mar 2023)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    ERROR  skipped

Summary

Package: metavizr
Version: 1.23.1
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data metavizr
StartedAt: 2023-04-20 05:06:16 -0400 (Thu, 20 Apr 2023)
EndedAt: 2023-04-20 05:07:25 -0400 (Thu, 20 Apr 2023)
EllapsedTime: 68.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data metavizr
###
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* checking for file ‘metavizr/DESCRIPTION’ ... OK
* preparing ‘metavizr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘IntroToMetavizr.Rmd’ using rmarkdown
Quitting from lines 95-124 (IntroToMetavizr.Rmd) 
Error: processing vignette 'IntroToMetavizr.Rmd' failed with diagnostics:
object 'msd16s' not found
--- failed re-building ‘IntroToMetavizr.Rmd’

SUMMARY: processing the following file failed:
  ‘IntroToMetavizr.Rmd’

Error: Vignette re-building failed.
Execution halted