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This page was generated on 2024-03-29 11:36:57 -0400 (Fri, 29 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4669
palomino4Windows Server 2022 Datacenterx644.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" 4404
merida1macOS 12.7.1 Montereyx86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4427
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1183/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MEDME 1.62.0  (landing page)
Mattia Pelizzola
Snapshot Date: 2024-03-27 14:05:05 -0400 (Wed, 27 Mar 2024)
git_url: https://git.bioconductor.org/packages/MEDME
git_branch: RELEASE_3_18
git_last_commit: 4158041
git_last_commit_date: 2023-10-24 09:40:36 -0400 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

BUILD BIN results for MEDME on palomino4


To the developers/maintainers of the MEDME package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MEDME.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MEDME
Version: 1.62.0
Command: rm -rf MEDME.buildbin-libdir && mkdir MEDME.buildbin-libdir && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD INSTALL --build --library=MEDME.buildbin-libdir MEDME_1.62.0.tar.gz
StartedAt: 2024-03-28 07:17:51 -0400 (Thu, 28 Mar 2024)
EndedAt: 2024-03-28 07:18:22 -0400 (Thu, 28 Mar 2024)
EllapsedTime: 31.0 seconds
RetCode: 0
Status:   OK  
PackageFile: MEDME_1.62.0.zip
PackageFileSize: 548.2 KiB

Command output

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###
### Running command:
###
###   rm -rf MEDME.buildbin-libdir && mkdir MEDME.buildbin-libdir && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD INSTALL --build --library=MEDME.buildbin-libdir MEDME_1.62.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'MEDME' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.3.0'
gcc  -I"F:/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c MEDMEweight.c -o MEDMEweight.o
MEDMEweight.c: In function 'MEDMEweight':
MEDMEweight.c:78:19: warning: 'weight' may be used uninitialized [-Wmaybe-uninitialized]
   78 |         weightSum = weightSum + weight;
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
MEDMEweight.c:30:10: note: 'weight' was declared here
   30 |   double weight, relPos;
      |          ^~~~~~
MEDMEweight.c:91:9: warning: 'Max' may be used uninitialized [-Wmaybe-uninitialized]
   91 |       if(AMSfinal[i] > Max) {AMSfinal[i] = Max;}
      |         ^
MEDMEweight.c:36:24: note: 'Max' was declared here
   36 |   double B,C,D,E, Min, Max, Mlim;
      |                        ^~~
MEDMEweight.c:92:42: warning: 'Min' may be used uninitialized [-Wmaybe-uninitialized]
   92 |       if(AMSfinal[i] < Min) {AMSfinal[i] = Min;}
      |                              ~~~~~~~~~~~~^~~~~
MEDMEweight.c:36:19: note: 'Min' was declared here
   36 |   double B,C,D,E, Min, Max, Mlim;
      |                   ^~~
MEDMEweight.c:90:33: warning: 'E' may be used uninitialized [-Wmaybe-uninitialized]
   90 |       AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
      |                                 ^~~~~~~~
MEDMEweight.c:36:16: note: 'E' was declared here
   36 |   double B,C,D,E, Min, Max, Mlim;
      |                ^
MEDMEweight.c:90:47: warning: 'D' may be used uninitialized [-Wmaybe-uninitialized]
   90 |       AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
      |                                            ~~~^~~~~~~
MEDMEweight.c:36:14: note: 'D' was declared here
   36 |   double B,C,D,E, Min, Max, Mlim;
      |              ^
MEDMEweight.c:90:63: warning: 'C' may be used uninitialized [-Wmaybe-uninitialized]
   90 |       AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
      |                                                         ~~~~~~^~~~
MEDMEweight.c:36:12: note: 'C' was declared here
   36 |   double B,C,D,E, Min, Max, Mlim;
      |            ^
MEDMEweight.c:90:33: warning: 'B' may be used uninitialized [-Wmaybe-uninitialized]
   90 |       AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
      |                                 ^~~~~~~~
MEDMEweight.c:36:10: note: 'B' was declared here
   36 |   double B,C,D,E, Min, Max, Mlim;
      |          ^
gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.18-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.18-bioc/meat/MEDME.buildbin-libdir/00LOCK-MEDME/00new/MEDME/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MEDME' as MEDME_1.62.0.zip
* DONE (MEDME)