Mac ARM64 build report for BioC 3.20 - CHECK results for graper on kjohnson1

Hostname	OS	Arch (*)	R version	Installed pkgs
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"	4381
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

Package: graper

Version: 1.21.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz

StartedAt: 2024-05-19 15:17:15 -0400 (Sun, 19 May 2024)

EndedAt: 2024-05-19 15:18:26 -0400 (Sun, 19 May 2024)

EllapsedTime: 71.5 seconds

RetCode: 0

Status: WARNINGS

CheckDir: graper.Rcheck

Warnings: 1

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.20-bioc-mac-arm64/meat/graper.Rcheck’
* using R version 4.4.0 Patched (2024-04-24 r86482)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.21.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
  /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
  #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.20-bioc-mac-arm64/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.20-bioc-mac-arm64/meat/graper.Rcheck/00check.log’
for details.

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
#    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
     ^
1 warning generated.
clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)


R version 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-844.703
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.605
ELB improved by 255.098

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-532.665
ELB improved by 56.9402

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.33
ELB improved by 45.3344

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.183
ELB improved by 25.1471

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.651
ELB improved by 9.53213

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.914
ELB improved by 4.73672

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.769
ELB improved by 4.14503

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.442
ELB improved by 4.32741

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.659
ELB improved by 4.78307

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.411
ELB improved by 5.2475

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.085
ELB improved by 5.32661

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.443
ELB improved by 4.64186

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.094
ELB improved by 3.34844

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.981
ELB improved by 2.11377

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.639
ELB improved by 1.3412

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.655
ELB improved by 0.984236

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.76
ELB improved by 0.894653

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.851
ELB improved by 0.909324

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.032
ELB improved by 0.819467

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.404
ELB improved by 0.628049

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.928
ELB improved by 0.475883

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.544
ELB improved by 0.383248

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.217
ELB improved by 0.327646

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.924
ELB improved by 0.293079

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.654
ELB improved by 0.269619

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.402
ELB improved by 0.251761

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.166
ELB improved by 0.236833

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.942
ELB improved by 0.223651

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.73
ELB improved by 0.211759

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.529
ELB improved by 0.201089

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.337
ELB improved by 0.191812

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.153
ELB improved by 0.184302

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.974
ELB improved by 0.179198

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.796
ELB improved by 0.177611

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.614
ELB improved by 0.181579

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.42
ELB improved by 0.194963

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.195
ELB improved by 0.224517

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.917
ELB improved by 0.277751

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.57
ELB improved by 0.3473

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.176
ELB improved by 0.39376

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.785
ELB improved by 0.391237

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.42
ELB improved by 0.364639

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.082
ELB improved by 0.338509

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.763
ELB improved by 0.318359

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.46
ELB improved by 0.303467

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.167
ELB improved by 0.29256

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.883
ELB improved by 0.284525

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.605
ELB improved by 0.278274

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.332
ELB improved by 0.27268

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.065
ELB improved by 0.266642

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.806
ELB improved by 0.259227

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.556
ELB improved by 0.249791

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.318
ELB improved by 0.238034

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.094
ELB improved by 0.22399

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.886
ELB improved by 0.207993

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.696
ELB improved by 0.19066

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.523
ELB improved by 0.172885

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.367
ELB improved by 0.155797

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.226
ELB improved by 0.140725

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.097
ELB improved by 0.129313

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.973
ELB improved by 0.124081

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.843
ELB improved by 0.130218

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.682
ELB improved by 0.160353

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.441
ELB improved by 0.241187

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.064
ELB improved by 0.377378

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.638
ELB improved by 0.425276

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.329
ELB improved by 0.309616

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.141
ELB improved by 0.187741

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.025
ELB improved by 0.116213

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.948
ELB improved by 0.0771803

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.893
ELB improved by 0.054733

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.852
ELB improved by 0.0409755

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.82
ELB improved by 0.0320823

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.794
ELB improved by 0.0260629

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.772
ELB improved by 0.0218095

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.753
ELB improved by 0.0186788

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.737
ELB improved by 0.016287

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.723
ELB improved by 0.0143997

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.71
ELB improved by 0.0128703

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.698
ELB improved by 0.011604

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.688
ELB improved by 0.0105379

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.678
ELB improved by 0.00962838

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-827.195
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.205
ELB improved by 261.991

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.515
ELB improved by 61.6893

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.321
ELB improved by 45.1948

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.99
ELB improved by 20.3305

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.734
ELB improved by 7.25645

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.857
ELB improved by 3.8763

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.95
ELB improved by 2.9071

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.429
ELB improved by 2.52135

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.05
ELB improved by 2.37923

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.698
ELB improved by 2.35167

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.319
ELB improved by 2.37938

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.881
ELB improved by 2.4372

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.367
ELB improved by 2.51424

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.77
ELB improved by 2.59669

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.117
ELB improved by 2.6537

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.484
ELB improved by 2.63275

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.004
ELB improved by 2.48017

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.819
ELB improved by 2.18533

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.018
ELB improved by 1.8008

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.615
ELB improved by 1.40268

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.572
ELB improved by 1.0434

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.816
ELB improved by 0.755649

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.262
ELB improved by 0.553636

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.837
ELB improved by 0.425414

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.489
ELB improved by 0.347589

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.189
ELB improved by 0.300404

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.918
ELB improved by 0.27116

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.665
ELB improved by 0.25248

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.425
ELB improved by 0.240175

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.193
ELB improved by 0.231836

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.967
ELB improved by 0.226029

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.745
ELB improved by 0.22189

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.526
ELB improved by 0.218909

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.31
ELB improved by 0.216837

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.094
ELB improved by 0.215653

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.878
ELB improved by 0.215567

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.661
ELB improved by 0.217067

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.44
ELB improved by 0.221029

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.211
ELB improved by 0.228943

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.968
ELB improved by 0.243366

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.699
ELB improved by 0.268723

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.387
ELB improved by 0.31224

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.004
ELB improved by 0.38282

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.523
ELB improved by 0.481538

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.936
ELB improved by 0.586924

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.263
ELB improved by 0.6723

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.524
ELB improved by 0.739165

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.725
ELB improved by 0.799314

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.867
ELB improved by 0.858389

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.94
ELB improved by 0.926758

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.902
ELB improved by 1.03801

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.638
ELB improved by 1.26383

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.043
ELB improved by 1.59483

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.254
ELB improved by 1.78884

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.381
ELB improved by 1.87298

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.72
ELB improved by 1.66108

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.633
ELB improved by 1.08745

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.978
ELB improved by 0.654542

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.56
ELB improved by 0.418196

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.275
ELB improved by 0.285119

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.076
ELB improved by 0.198711

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.94
ELB improved by 0.136667

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.846
ELB improved by 0.0934794

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.781
ELB improved by 0.0655046

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.733
ELB improved by 0.0480506

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.695
ELB improved by 0.0371144

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.665
ELB improved by 0.0300341

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.64
ELB improved by 0.0252169

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.618
ELB improved by 0.0217471

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.599
ELB improved by 0.0191074

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.582
ELB improved by 0.0170094

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.567
ELB improved by 0.0152945

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.553
ELB improved by 0.0138763

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.54
ELB improved by 0.0127086

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.529
ELB improved by 0.0117664

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.518
ELB improved by 0.0110383

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.507
ELB improved by 0.0105229

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.497
ELB improved by 0.0102301

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.487
ELB improved by 0.0101856

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.476
ELB improved by 0.0104379

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.465
ELB improved by 0.0110704

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.453
ELB improved by 0.0122178

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.439
ELB improved by 0.014089

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.422
ELB improved by 0.0169904

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.401
ELB improved by 0.0213335

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.373
ELB improved by 0.0275872

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.337
ELB improved by 0.0361265

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.29
ELB improved by 0.046994

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.23
ELB improved by 0.0596852

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.157
ELB improved by 0.0727861

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.075
ELB improved by 0.0828416

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.99
ELB improved by 0.0841536

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.916
ELB improved by 0.0739871

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.859
ELB improved by 0.0576906

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.816
ELB improved by 0.0429763

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.783
ELB improved by 0.0329618

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.756
ELB improved by 0.0271714

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.731
ELB improved by 0.0244624

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.707
ELB improved by 0.0240736

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.681
ELB improved by 0.0255833

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.653
ELB improved by 0.0285757

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.621
ELB improved by 0.0322137

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.586
ELB improved by 0.0349525

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.551
ELB improved by 0.0349507

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.519
ELB improved by 0.0313557

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.494
ELB improved by 0.025198

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.476
ELB improved by 0.0185611

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.463
ELB improved by 0.013025

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.454
ELB improved by 0.00908227

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-834.056
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.361
ELB improved by 244.696

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.385
ELB improved by 63.9758

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.495
ELB improved by 49.8901

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.313
ELB improved by 23.1817

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.827
ELB improved by 8.4861

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.603
ELB improved by 4.22405

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.585
ELB improved by 3.01789

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.953
ELB improved by 2.6322

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.464
ELB improved by 2.48929

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.033
ELB improved by 2.43024

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.645
ELB improved by 2.38784

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.331
ELB improved by 2.31484

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.166
ELB improved by 2.16492

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.262
ELB improved by 1.90364

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.718
ELB improved by 1.54435

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.559
ELB improved by 1.15846

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.733
ELB improved by 0.826619

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.147
ELB improved by 0.586051

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.718
ELB improved by 0.428745

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.388
ELB improved by 0.329336

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.123
ELB improved by 0.265174

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.902
ELB improved by 0.221525

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.712
ELB improved by 0.190001

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.546
ELB improved by 0.166036

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.399
ELB improved by 0.147112

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.267
ELB improved by 0.131767

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.148
ELB improved by 0.119096

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.039
ELB improved by 0.108499

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.94
ELB improved by 0.0995556

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.848
ELB improved by 0.0919631

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.762
ELB improved by 0.0854942

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.682
ELB improved by 0.0799751

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.607
ELB improved by 0.0752706

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.536
ELB improved by 0.0712743

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.468
ELB improved by 0.067902

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.403
ELB improved by 0.0650871

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.34
ELB improved by 0.0627776

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.279
ELB improved by 0.0609339

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.219
ELB improved by 0.0595273

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.161
ELB improved by 0.0585391

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.103
ELB improved by 0.0579602

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.045
ELB improved by 0.0577913

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.987
ELB improved by 0.0580437

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.928
ELB improved by 0.0587398

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.869
ELB improved by 0.0599156

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.807
ELB improved by 0.0616231

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.743
ELB improved by 0.0639337

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.676
ELB improved by 0.066944

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.605
ELB improved by 0.0707829

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.53
ELB improved by 0.0756215

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.448
ELB improved by 0.0816875

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.359
ELB improved by 0.0892851

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.26
ELB improved by 0.0988234

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.149
ELB improved by 0.110857

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.023
ELB improved by 0.126145

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.877
ELB improved by 0.145738

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.706
ELB improved by 0.171095

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.502
ELB improved by 0.204255

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.254
ELB improved by 0.248025

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.948
ELB improved by 0.306111

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.565
ELB improved by 0.38293

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.082
ELB improved by 0.482806

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.473
ELB improved by 0.609147

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.706
ELB improved by 0.766957

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.735
ELB improved by 0.971227

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.493
ELB improved by 1.24162

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.984
ELB improved by 1.50903

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.448
ELB improved by 1.53565

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.165
ELB improved by 1.28293

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.212
ELB improved by 0.952843

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.553
ELB improved by 0.659403

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.115
ELB improved by 0.437759

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.828
ELB improved by 0.287096

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.638
ELB improved by 0.190508

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.508
ELB improved by 0.129935

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.416
ELB improved by 0.0919432

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.348
ELB improved by 0.0678197

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.296
ELB improved by 0.0521656

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.254
ELB improved by 0.0416507

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.22
ELB improved by 0.0342097

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.191
ELB improved by 0.0285774

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.167
ELB improved by 0.0240234

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.147
ELB improved by 0.0201788

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.13
ELB improved by 0.016895

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.116
ELB improved by 0.0141252

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.104
ELB improved by 0.0118429

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.094
ELB improved by 0.0100051

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.086
ELB improved by 0.00854921

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.23
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.092
ELB improved by 280.138

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.948
ELB improved by 60.1439

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.086
ELB improved by 40.8622

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.133
ELB improved by 20.9525

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.254
ELB improved by 9.87916

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.927
ELB improved by 5.32768

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.982
ELB improved by 3.94414

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.485
ELB improved by 3.49772

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.105
ELB improved by 3.38004

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.791
ELB improved by 3.31318

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.673
ELB improved by 3.11815

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.969
ELB improved by 2.70396

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.85
ELB improved by 2.1197

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.328
ELB improved by 1.52214

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.285
ELB improved by 1.04284

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.568
ELB improved by 0.716746

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.053
ELB improved by 0.515419

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.656
ELB improved by 0.396399

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.33
ELB improved by 0.325962

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.047
ELB improved by 0.28292

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.792
ELB improved by 0.255626

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.553
ELB improved by 0.238191

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.326
ELB improved by 0.227719

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.103
ELB improved by 0.222698

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.881
ELB improved by 0.22221

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.655
ELB improved by 0.225627

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.423
ELB improved by 0.232515

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.18
ELB improved by 0.242618

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.924
ELB improved by 0.25585

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.652
ELB improved by 0.27231

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.36
ELB improved by 0.292299

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.043
ELB improved by 0.316374

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.698
ELB improved by 0.34543

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.317
ELB improved by 0.380848

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.892
ELB improved by 0.424677

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.413
ELB improved by 0.479719

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.864
ELB improved by 0.548854

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.232
ELB improved by 0.632073

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.51
ELB improved by 0.721135

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.71
ELB improved by 0.800736

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.845
ELB improved by 0.86475

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.919
ELB improved by 0.926239

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.913
ELB improved by 1.00619

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.8
ELB improved by 1.11257

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.599
ELB improved by 1.20137

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.413
ELB improved by 1.18604

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.331
ELB improved by 1.08121

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.371
ELB improved by 0.960771

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.532
ELB improved by 0.838592

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.79
ELB improved by 0.742506

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.069
ELB improved by 0.720743

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.259
ELB improved by 0.809713

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.308
ELB improved by 0.950661

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.402
ELB improved by 0.906577

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.69
ELB improved by 0.71202

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.1
ELB improved by 0.589965

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.535
ELB improved by 0.564714

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.972
ELB improved by 0.563281

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.494
ELB improved by 0.478206

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.194
ELB improved by 0.29957

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.036
ELB improved by 0.158531

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.944
ELB improved by 0.0916457

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.882
ELB improved by 0.0623107

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.834
ELB improved by 0.0476718

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.795
ELB improved by 0.0390048

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.762
ELB improved by 0.0330513

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.733
ELB improved by 0.0285333

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.708
ELB improved by 0.0249061

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.687
ELB improved by 0.0219054

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.667
ELB improved by 0.0193822

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.65
ELB improved by 0.01724

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.634
ELB improved by 0.0154097

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.621
ELB improved by 0.0138386

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.608
ELB improved by 0.012485

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.597
ELB improved by 0.0113149

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.587
ELB improved by 0.0103005

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.577
ELB improved by 0.0094187

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.781   0.223   3.064

name	user	system	elapsed
coef.graper	0.090	0.016	0.106
getPIPs	0.083	0.013	0.096
graper	0.140	0.018	0.160
makeExampleData	0.014	0.001	0.014
makeExampleDataWithUnequalGroups	0.034	0.002	0.036
plotELBO	0.267	0.017	0.285
plotGroupPenalties	0.725	0.023	0.755
plotPosterior	0.614	0.017	0.634
predict.graper	3.103	0.113	3.251
print.graper	0.084	0.015	0.100

CHECK results for graper on kjohnson1

Summary

Command output

Installation output

Tests output

Example timings