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This page was generated on 2024-05-20 11:32:21 -0400 (Mon, 20 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.6 Venturaarm644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4381
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Package 1973/2233HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SpatialFeatureExperiment 1.7.0  (landing page)
Lambda Moses
Snapshot Date: 2024-05-18 09:00:01 -0400 (Sat, 18 May 2024)
git_url: https://git.bioconductor.org/packages/SpatialFeatureExperiment
git_branch: devel
git_last_commit: 2ef9eae
git_last_commit_date: 2024-05-16 21:10:28 -0400 (Thu, 16 May 2024)
kjohnson1macOS 13.6.6 Ventura / arm64  OK    ERROR  skippedskipped

INSTALL results for SpatialFeatureExperiment on kjohnson1


To the developers/maintainers of the SpatialFeatureExperiment package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SpatialFeatureExperiment
Version: 1.7.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL SpatialFeatureExperiment
StartedAt: 2024-05-18 11:23:45 -0400 (Sat, 18 May 2024)
EndedAt: 2024-05-18 11:24:47 -0400 (Sat, 18 May 2024)
EllapsedTime: 62.0 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL SpatialFeatureExperiment
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘SpatialFeatureExperiment’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for ‘toSpatialFeatureExperiment’ with signature ‘"Seurat"’: no definition for class “Seurat”
Creating a generic function for ‘NROW’ from package ‘base’ in package ‘SpatialFeatureExperiment’
Creating a generic function for ‘NCOL’ from package ‘base’ in package ‘SpatialFeatureExperiment’
Creating a generic function for ‘saveRDS’ from package ‘base’ in package ‘SpatialFeatureExperiment’
Creating a generic function for ‘readRDS’ from package ‘base’ in package ‘SpatialFeatureExperiment’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SpatialFeatureExperiment)