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INSTALL report for bigmelon on tokay2

This page was generated on 2019-10-16 12:36:46 -0400 (Wed, 16 Oct 2019).

Package 135/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bigmelon 1.10.0
Tyler J. Gorrie-Stone
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/bigmelon
Branch: RELEASE_3_9
Last Commit: 9efb146
Last Changed Date: 2019-05-02 11:54:03 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: bigmelon
Version: 1.10.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/bigmelon_1.10.0.tar.gz && rm -rf bigmelon.buildbin-libdir && mkdir bigmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bigmelon.buildbin-libdir bigmelon_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL bigmelon_1.10.0.zip && rm bigmelon_1.10.0.tar.gz bigmelon_1.10.0.zip
StartedAt: 2019-10-15 21:13:19 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 21:14:53 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 94.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/bigmelon_1.10.0.tar.gz && rm -rf bigmelon.buildbin-libdir && mkdir bigmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bigmelon.buildbin-libdir bigmelon_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL bigmelon_1.10.0.zip && rm bigmelon_1.10.0.tar.gz bigmelon_1.10.0.zip
###
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install for i386

* installing *source* package 'bigmelon' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'fot' in package 'bigmelon'
Creating a new generic function for 'predictSex' in package 'bigmelon'
** help
*** installing help indices
  converting help for package 'bigmelon'
    finding HTML links ... done
    GEOtoGDS                                html  
    app2gds                                 html  
    backupGdsn                              html  
    bigmelon-accessors                      html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpyQ5o6Q/R.INSTALL2a18bda798f/bigmelon/man/bigmelon-accessors.Rd:102: file link 'methylumi' in package 'methylumi' does not exist and so has been treated as a topic
    bigmelon-internal                       html  
    bigmelon-normalization                  html  
    finding level-2 HTML links ... done

    bigmelon-package                        html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpyQ5o6Q/R.INSTALL2a18bda798f/bigmelon/man/bigmelon-package.Rd:37: file link 'methylumi' in package 'methylumi' does not exist and so has been treated as a topic
    bumphunterGdsn                          html  
    cantaloupe                              html  
    combogds                                html  
    ecc                                     html  
    es2gds                                  html  
    finalreport2gds                         html  
    gds2mlumi                               html  
    getquantilesandranks                    html  
    iadd                                    html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpyQ5o6Q/R.INSTALL2a18bda798f/bigmelon/man/iadd.Rd:46: file link 'methylumIDATepic' in package 'wateRmelon' does not exist and so has been treated as a topic
    pfiltergds                              html  
    prcompgdsn                              html  
    pwodgdsn                                html  
    rankednorm                              html  
    redirect                                html  
    wm-port                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'bigmelon' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bigmelon' as bigmelon_1.10.0.zip
* DONE (bigmelon)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'bigmelon' successfully unpacked and MD5 sums checked