Peter Hickey
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/DelayedMatrixStats |
| Branch: RELEASE_3_9 |
| Last Commit: 4378d18 |
| Last Changed Date: 2019-09-08 05:41:20 -0400 (Sun, 08 Sep 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:39:44 -0400 (Wed, 16 Oct 2019).
| Package 412/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DelayedMatrixStats 1.6.1 Peter Hickey
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: DelayedMatrixStats |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DelayedMatrixStats_1.6.1.tar.gz && rm -rf DelayedMatrixStats.buildbin-libdir && mkdir DelayedMatrixStats.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedMatrixStats.buildbin-libdir DelayedMatrixStats_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DelayedMatrixStats_1.6.1.zip && rm DelayedMatrixStats_1.6.1.tar.gz DelayedMatrixStats_1.6.1.zip |
| StartedAt: 2019-10-15 19:29:10 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:30:30 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 80.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DelayedMatrixStats_1.6.1.tar.gz && rm -rf DelayedMatrixStats.buildbin-libdir && mkdir DelayedMatrixStats.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedMatrixStats.buildbin-libdir DelayedMatrixStats_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DelayedMatrixStats_1.6.1.zip && rm DelayedMatrixStats_1.6.1.tar.gz DelayedMatrixStats_1.6.1.zip
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install for i386
* installing *source* package 'DelayedMatrixStats' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DelayedMatrixStats'
finding HTML links ... done
DelayedMatrixStats html
colAlls html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colAlls.Rd:70: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colAnyNAs html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colAnyNAs.Rd:53: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colAvgsPerRowSet html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colAvgsPerRowSet.Rd:59: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colCollapse html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCollapse.Rd:45: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCollapse.Rd:83: file link '[' in package 'base' does not exist and so has been treated as a topic
colCounts html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCounts.Rd:51: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colCummaxs html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCummaxs.Rd:87: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCummaxs.Rd:133: file link 'cumprod' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCummaxs.Rd:134: file link 'cummin' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colCummaxs.Rd:134: file link 'cummax' in package 'base' does not exist and so has been treated as a topic
colDiffs html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colDiffs.Rd:51: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colIQRDiffs html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colIQRDiffs.Rd:117: file link 'var' in package 'stats' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colIQRDiffs.Rd:108: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colIQRDiffs.Rd:172: file link 'var' in package 'stats' does not exist and so has been treated as a topic
colIQRs html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colIQRs.Rd:41: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colLogSumExps html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colLogSumExps.Rd:49: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colMads html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colMads.Rd:73: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colMeans2 html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colMeans2.Rd:59: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colMedians html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colMedians.Rd:47: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colOrderStats html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colOrderStats.Rd:46: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colProds html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colProds.Rd:52: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colProds.Rd:78: file link 'is.nan' in package 'base' does not exist and so has been treated as a topic
colQuantiles html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colQuantiles.Rd:55: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colRanks html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colRanks.Rd:56: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colSums2 html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colSums2.Rd:59: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colTabulates html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colTabulates.Rd:42: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colVars html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colVars.Rd:51: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colWeightedMads html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colWeightedMads.Rd:59: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colWeightedMeans html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colWeightedMeans.Rd:47: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colWeightedMedians html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colWeightedMedians.Rd:47: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
colWeightedVars html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colWeightedVars.Rd:66: file link 'getAutoBlockSize' in package 'DelayedArray' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpUzF9wL/R.INSTALL85025857c0a/DelayedMatrixStats/man/colWeightedVars.Rd:115: file link 'var' in package 'stats' does not exist and so has been treated as a topic
from_DelayedArray_to_simple_seed_class
html
rowblock_APPLY html
seedClass html
subset_by_Nindex html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DelayedMatrixStats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DelayedMatrixStats' as DelayedMatrixStats_1.6.1.zip
* DONE (DelayedMatrixStats)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'DelayedMatrixStats' successfully unpacked and MD5 sums checked