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INSTALL report for wateRmelon on tokay2

This page was generated on 2019-10-16 12:27:16 -0400 (Wed, 16 Oct 2019).

Package 1719/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
wateRmelon 1.28.0
Leo
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/wateRmelon
Branch: RELEASE_3_9
Last Commit: 644bca4
Last Changed Date: 2019-05-02 11:53:39 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: wateRmelon
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/wateRmelon_1.28.0.tar.gz && rm -rf wateRmelon.buildbin-libdir && mkdir wateRmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wateRmelon.buildbin-libdir wateRmelon_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL wateRmelon_1.28.0.zip && rm wateRmelon_1.28.0.tar.gz wateRmelon_1.28.0.zip
StartedAt: 2019-10-15 21:11:44 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 21:13:16 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 91.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/wateRmelon_1.28.0.tar.gz && rm -rf wateRmelon.buildbin-libdir && mkdir wateRmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wateRmelon.buildbin-libdir wateRmelon_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL wateRmelon_1.28.0.zip && rm wateRmelon_1.28.0.tar.gz wateRmelon_1.28.0.zip
###
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install for i386

* installing *source* package 'wateRmelon' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function from function 'as.methylumi' in package 'wateRmelon'
Note: possible error in 'preprocessIlluminaMethylation(path2data = path2data, ': unused arguments (path2data = path2data, path2controlData = path2controlData, projectName = projectName) 
** help
*** installing help indices
  converting help for package 'wateRmelon'
    finding HTML links ... done
    BMIQ                                    html  
    Beta2M                                  html  
    adaptRefQuantiles                       html  
    agep                                    html  
    as.methylumi-methods                    html  
    beadc                                   html  
    beadcount                               html  
    bscon                                   html  
    colnames-methods                        html  
    combo                                   html  
    dasen-MethyLumiSet                      html  
    dasen-MethySet                          html  
    dasen-exprmethy450                      html  
    dasen                                   html  
    db1                                     html  
    dmrse-methods                           html  
    dmrse                                   html  
    estimateCellCounts.wmln                 html  
    genki-methods                           html  
    genki                                   html  
    genkme                                  html  
    got                                     html  
    iDMR                                    html  
    melon                                   html  
    metrics                                 html  
    outlyx-methods                          html  
    outlyx                                  html  
    pfilter                                 html  
    predictSex                              html  
    pwod-methods                            html  
    pwod                                    html  
    qual                                    html  
    readEPIC                                html  
    seabi-methods                           html  
    seabi                                   html  
    seabird                                 html  
    sextest                                 html  
    wateRmelon-package                      html  
    wm_internal                             html  
** building package indices
** installing vignettes
   'wateRmelon.Rnw' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'wateRmelon' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'wateRmelon' as wateRmelon_1.28.0.zip
* DONE (wateRmelon)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'wateRmelon' successfully unpacked and MD5 sums checked