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INSTALL report for singscore on tokay2

This page was generated on 2019-10-16 12:41:24 -0400 (Wed, 16 Oct 2019).

Package 1533/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
singscore 1.4.0
Dharmesh D. Bhuva
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/singscore
Branch: RELEASE_3_9
Last Commit: 00685d7
Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: singscore
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/singscore_1.4.0.tar.gz && rm -rf singscore.buildbin-libdir && mkdir singscore.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=singscore.buildbin-libdir singscore_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL singscore_1.4.0.zip && rm singscore_1.4.0.tar.gz singscore_1.4.0.zip
StartedAt: 2019-10-15 20:55:46 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:57:07 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 80.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/singscore_1.4.0.tar.gz && rm -rf singscore.buildbin-libdir && mkdir singscore.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=singscore.buildbin-libdir singscore_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL singscore_1.4.0.zip && rm singscore_1.4.0.tar.gz singscore_1.4.0.zip
###
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100 2672k  100 2672k    0     0  19.9M      0 --:--:-- --:--:-- --:--:-- 21.0M

install for i386

* installing *source* package 'singscore' ...
** using staged installation
It is recommended to use 'given' instead of 'middle'.
It is recommended to use 'given' instead of 'middle'.
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'singscore'
    finding HTML links ... done
    generateNull                            html  
    generateNull_intl                       html  
    getPvals                                html  
    multiScore                              html  
    finding level-2 HTML links ... done

    plotDispersion                          html  
    plotNull                                html  
    plotRankDensity                         html  
    plotRankDensity_intl                    html  
    plotScoreLandscape                      html  
    projectScoreLandscape                   html  
    rankExpr                                html  
    rankGenes                               html  
    scoredf_ccle_epi                        html  
    scoredf_ccle_mes                        html  
    scoredf_tcga_epi                        html  
    scoredf_tcga_mes                        html  
    simpleScore                             html  
    singscore                               html  
    tgfb_expr_10_se                         html  
    tgfb_gs_dn                              html  
    tgfb_gs_up                              html  
    toy_expr_se                             html  
    toy_gs_dn                               html  
    toy_gs_up                               html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'singscore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'singscore' as singscore_1.4.0.zip
* DONE (singscore)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'singscore' successfully unpacked and MD5 sums checked