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INSTALL report for scoreInvHap on tokay2

This page was generated on 2019-10-16 12:38:47 -0400 (Wed, 16 Oct 2019).

Package 1475/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scoreInvHap 1.6.0
Carlos Ruiz
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/scoreInvHap
Branch: RELEASE_3_9
Last Commit: 1e5a6ff
Last Changed Date: 2019-05-02 11:54:07 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: scoreInvHap
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/scoreInvHap_1.6.0.tar.gz && rm -rf scoreInvHap.buildbin-libdir && mkdir scoreInvHap.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scoreInvHap.buildbin-libdir scoreInvHap_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL scoreInvHap_1.6.0.zip && rm scoreInvHap_1.6.0.tar.gz scoreInvHap_1.6.0.zip
StartedAt: 2019-10-15 20:30:49 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:31:54 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 65.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/scoreInvHap_1.6.0.tar.gz && rm -rf scoreInvHap.buildbin-libdir && mkdir scoreInvHap.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scoreInvHap.buildbin-libdir scoreInvHap_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL scoreInvHap_1.6.0.zip && rm scoreInvHap_1.6.0.tar.gz scoreInvHap_1.6.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 32  449k   32  144k    0     0  2152k      0 --:--:-- --:--:-- --:--:-- 2360k
100  449k  100  449k    0     0  6423k      0 --:--:-- --:--:-- --:--:-- 7016k

install for i386

* installing *source* package 'scoreInvHap' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scoreInvHap'
    finding HTML links ... done
    Refs                                    html  
    SNPsR2                                  html  
    adaptRefs                               html  
    classifSNPs                             html  
    computeScore                            html  
    correctAlleleTable                      html  
    getAlleleTable                          html  
    getGenotypesTable                       html  
    getInvStatus                            html  
    hetRefs                                 html  
    prepareMap                              html  
    scoreInvHap                             html  
    scoreInvHapRes-class                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'scoreInvHap' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scoreInvHap' as scoreInvHap_1.6.0.zip
* DONE (scoreInvHap)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'scoreInvHap' successfully unpacked and MD5 sums checked