Vladimir Kiselev
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/scfind |
| Branch: RELEASE_3_9 |
| Last Commit: 99f610b |
| Last Changed Date: 2019-05-02 11:54:08 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:39:28 -0400 (Wed, 16 Oct 2019).
| Package 1467/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| scfind 1.6.0 Vladimir Kiselev
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: scfind |
| Version: 1.6.0 |
| Command: rm -rf scfind.buildbin-libdir && mkdir scfind.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scfind.buildbin-libdir scfind_1.6.0.tar.gz |
| StartedAt: 2019-10-16 10:10:17 -0400 (Wed, 16 Oct 2019) |
| EndedAt: 2019-10-16 10:11:17 -0400 (Wed, 16 Oct 2019) |
| EllapsedTime: 60.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: scfind_1.6.0.zip |
| PackageFileSize: 3.386 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf scfind.buildbin-libdir && mkdir scfind.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scfind.buildbin-libdir scfind_1.6.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'scfind' ... ** using staged installation ** libs C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c eliasFano.cpp -o eliasFano.o eliasFano.cpp: In function 'std::vectorint2bin(int)': eliasFano.cpp:8:9: warning: unused variable 'rem' [-Wunused-variable] int rem; ^ eliasFano.cpp: In function 'Rcpp::NumericVector eliasFanoDecoding(Rcpp::LogicalVector, Rcpp::LogicalVector, int)': eliasFano.cpp:83:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int k = 0; k < h.size(); k++) { ^ C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o scfind.dll tmp.def RcppExports.o eliasFano.o -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/scfind.buildbin-libdir/00LOCK-scfind/00new/scfind/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'scfind' finding HTML links ... done ann html buildCellIndex html buildCellTypeIndex html findCell html findCellType html yan html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'scfind' ... ** libs C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c eliasFano.cpp -o eliasFano.o eliasFano.cpp: In function 'std::vector int2bin(int)': eliasFano.cpp:8:9: warning: unused variable 'rem' [-Wunused-variable] int rem; ^ eliasFano.cpp: In function 'Rcpp::NumericVector eliasFanoDecoding(Rcpp::LogicalVector, Rcpp::LogicalVector, int)': eliasFano.cpp:83:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int k = 0; k < h.size(); k++) { ^ C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o scfind.dll tmp.def RcppExports.o eliasFano.o -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/scfind.buildbin-libdir/scfind/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'scfind' as scfind_1.6.0.zip * DONE (scfind)