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INSTALL report for scde on malbec2

This page was generated on 2019-10-16 12:07:47 -0400 (Wed, 16 Oct 2019).

Package 1464/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scde 2.12.0
Jean Fan
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/scde
Branch: RELEASE_3_9
Last Commit: ec52dd0
Last Changed Date: 2019-05-02 11:53:58 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64 [ OK ] OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: scde
Version: 2.12.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL scde
StartedAt: 2019-10-15 18:43:53 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:45:00 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 66.6 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL scde
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘scde’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c bwpca.cpp -o bwpca.o
bwpca.cpp: In function ‘void set_random_matrix(arma::mat&, arma::mat&)’:
bwpca.cpp:23:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for(int j=0;j