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INSTALL report for scAlign on tokay2

This page was generated on 2019-10-16 12:44:07 -0400 (Wed, 16 Oct 2019).

Package 1459/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scAlign 1.0.0
Nelson Johansen
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/scAlign
Branch: RELEASE_3_9
Last Commit: ef247aa
Last Changed Date: 2019-05-02 11:54:15 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ ERROR ] ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: scAlign
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/scAlign_1.0.0.tar.gz && rm -rf scAlign.buildbin-libdir && mkdir scAlign.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scAlign.buildbin-libdir scAlign_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL scAlign_1.0.0.zip && rm scAlign_1.0.0.tar.gz scAlign_1.0.0.zip
StartedAt: 2019-10-15 20:14:52 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:16:39 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 107.0 seconds
RetCode: 1
Status:  ERROR  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/scAlign_1.0.0.tar.gz && rm -rf scAlign.buildbin-libdir && mkdir scAlign.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scAlign.buildbin-libdir scAlign_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL scAlign_1.0.0.zip && rm scAlign_1.0.0.tar.gz scAlign_1.0.0.zip
###
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100  634k  100  634k    0     0  9208k      0 --:--:-- --:--:-- --:--:--  9.9M

install for i386

* installing *source* package 'scAlign' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scAlign'
    finding HTML links ... done
    PlotTSNE                                html  
    alignment_score                         html  
    cellbench                               html  
    compute_kernel_matrix                   html  
    decoderModel_add_mse_loss               html  
    decoderModel_calc_projection            html  
    decoderModel_create_train_op            html  
    decoderModel_emb_to_proj                html  
    decoderModel_train_decoder              html  
    decoder_large                           html  
    decoder_medium                          html  
    decoder_small                           html  
    dot-check_all_args                      html  
    dot-check_tensorflow                    html  
    dot-data_setup                          html  
    dot-early_stop                          html  
    dot-is.wholenumber                      html  
    dot-learning_rate                       html  
    dot-plotTSNE                            html  
    encoderModel_add_logit_loss             html  
    encoderModel_add_semisup_loss_data_driven
                                            html  
    encoderModel_calc_embedding             html  
    encoderModel_calc_logit                 html  
    encoderModel_create_train_op            html  
    encoderModel_data_to_embedding          html  
    encoderModel_embedding_to_logit         html  
    encoderModel_gaussian_kernel            html  
    encoderModel_train_encoder              html  
    encoderModel_train_encoder_multi        html  
    encoder_large                           html  
    encoder_medium                          html  
    encoder_small                           html  
    gaussianKernel                          html  
    scAlign                                 html  
    scAlignArguments                        html  
    scAlignCreateObject                     html  
    scAlignMulti                            html  
    scAlignOptions                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'scAlign' ...
** testing if installed package can be loaded
Error: package or namespace load failed for 'scAlign':
 .onLoad failed in loadNamespace() for 'tensorflow', details:
  call: py_module_import(module, convert = convert)
  error: ImportError: No module named tensorflow
Error: loading failed
Execution halted
ERROR: loading failed
* removing 'C:/Users/biocbuild/bbs-3.9-bioc/meat/scAlign.buildbin-libdir/scAlign'
* restoring previous 'C:/Users/biocbuild/bbs-3.9-bioc/meat/scAlign.buildbin-libdir/scAlign'