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INSTALL report for rama on celaya2

This page was generated on 2019-10-16 12:44:57 -0400 (Wed, 16 Oct 2019).

Package 1307/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rama 1.58.0
Raphael Gottardo
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/rama
Branch: RELEASE_3_9
Last Commit: 3519fd0
Last Changed Date: 2019-05-02 11:53:02 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: rama
Version: 1.58.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL rama
StartedAt: 2019-10-15 18:13:10 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:13:32 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 22.1 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL rama
###
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##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library’
* installing *source* package ‘rama’ ...
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -c estimation_slice.c -o estimation_slice.o
estimation_slice.c:121:10: warning: unused variable 'SSeps_sd' [-Wunused-variable]
  double SSeps_sd=0.;
         ^
estimation_slice.c:122:10: warning: unused variable 'SSeps_sd_new' [-Wunused-variable]
  double SSeps_sd_new=0.;
         ^
estimation_slice.c:113:10: warning: unused variable 'lambda_eps1_new' [-Wunused-variable]
  double lambda_eps1_new, lambda_eps2_new;
         ^
estimation_slice.c:113:27: warning: unused variable 'lambda_eps2_new' [-Wunused-variable]
  double lambda_eps1_new, lambda_eps2_new;
                          ^
estimation_slice.c:116:17: warning: unused variable 'SSR2' [-Wunused-variable]
  double SSR1=0,SSR2=0,SS12=0;
                ^
estimation_slice.c:116:24: warning: unused variable 'SS12' [-Wunused-variable]
  double SSR1=0,SSR2=0,SS12=0;
                       ^
estimation_slice.c:117:10: warning: unused variable 'pi' [-Wunused-variable]
  double pi=3.14;
         ^
estimation_slice.c:115:25: warning: unused variable 'dens_epsilon_new' [-Wunused-variable]
  double dens_epsilon=0,dens_epsilon_new=0;
                        ^
estimation_slice.c:116:10: warning: unused variable 'SSR1' [-Wunused-variable]
  double SSR1=0,SSR2=0,SS12=0;
         ^
estimation_slice.c:114:10: warning: unused variable 'l_epsilon' [-Wunused-variable]
  double l_epsilon=0,l_epsilon_new=0;
         ^
estimation_slice.c:114:22: warning: unused variable 'l_epsilon_new' [-Wunused-variable]
  double l_epsilon=0,l_epsilon_new=0;
                     ^
estimation_slice.c:115:10: warning: unused variable 'dens_epsilon' [-Wunused-variable]
  double dens_epsilon=0,dens_epsilon_new=0;
         ^
12 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -c ex_estimation_slice.c -o ex_estimation_slice.o
ex_estimation_slice.c:119:19: warning: unused variable 'dens_t_new' [-Wunused-variable]
  double dens_t=0,dens_t_new=0;
                  ^
ex_estimation_slice.c:119:10: warning: unused variable 'dens_t' [-Wunused-variable]
  double dens_t=0,dens_t_new=0;
         ^
ex_estimation_slice.c:138:10: warning: unused variable 'sum_res2' [-Wunused-variable]
  double sum_res2;
         ^
ex_estimation_slice.c:137:10: warning: unused variable 'sum_res1' [-Wunused-variable]
  double sum_res1;
         ^
ex_estimation_slice.c:144:10: warning: unused variable 'old_a' [-Wunused-variable]
  double old_a=0,width_a=1.;
         ^
ex_estimation_slice.c:143:10: warning: unused variable 'old_b' [-Wunused-variable]
  double old_b=0,width_b=5.;
         ^
ex_estimation_slice.c:112:10: warning: unused variable 'pi' [-Wunused-variable]
  double pi=3.14;
         ^
7 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -c mean.sd.c -o mean.sd.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -c reorder.c -o reorder.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -c util.c -o util.o
util.c:574:11: warning: unused variable 'k' [-Wunused-variable]
  int i,j,k;
          ^
util.c:629:13: warning: & has lower precedence than >; > will be evaluated first [-Wparentheses]
  while(K>0 & (z' expression to silence this warning
  while(K>0 & (z0 & (z; > will be evaluated first [-Wparentheses]
  while(K>0 & (z' expression to silence this warning
  while(K>0 & (z0 & (z; > will be evaluated first [-Wparentheses]
  while(K>0 & (z' expression to silence this warning
  while(K>0 & (z0 & (z; > will be evaluated first [-Wparentheses]
  while(K>0 & (z' expression to silence this warning
  while(K>0 & (z0 & (z