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INSTALL report for rGREAT on tokay2

This page was generated on 2019-10-16 12:32:25 -0400 (Wed, 16 Oct 2019).

Package 1368/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rGREAT 1.16.1
Zuguang Gu
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/rGREAT
Branch: RELEASE_3_9
Last Commit: 55395cd
Last Changed Date: 2019-09-13 08:17:26 -0400 (Fri, 13 Sep 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: rGREAT
Version: 1.16.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/rGREAT_1.16.1.tar.gz && rm -rf rGREAT.buildbin-libdir && mkdir rGREAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rGREAT.buildbin-libdir rGREAT_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL rGREAT_1.16.1.zip && rm rGREAT_1.16.1.tar.gz rGREAT_1.16.1.zip
StartedAt: 2019-10-15 20:01:50 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:02:17 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 27.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/rGREAT_1.16.1.tar.gz && rm -rf rGREAT.buildbin-libdir && mkdir rGREAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rGREAT.buildbin-libdir rGREAT_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL rGREAT_1.16.1.zip && rm rGREAT_1.16.1.tar.gz rGREAT_1.16.1.zip
###
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100  839k  100  839k    0     0  2743k      0 --:--:-- --:--:-- --:--:-- 2806k

install for i386

* installing *source* package 'rGREAT' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rGREAT'
    finding HTML links ... done
    GreatJob-class                          html  
    GreatJob                                html  
    availableCategories-GreatJob-method     html  
    availableOntologies-GreatJob-method     html  
    getEnrichmentTables-GreatJob-method     html  
    plotRegionGeneAssociationGraphs-GreatJob-method
                                            html  
    submitGreatJob                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'rGREAT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rGREAT' as rGREAT_1.16.1.zip
* DONE (rGREAT)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'rGREAT' successfully unpacked and MD5 sums checked