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INSTALL report for plrs on tokay2

This page was generated on 2019-10-16 12:27:13 -0400 (Wed, 16 Oct 2019).

Package 1225/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
plrs 1.24.0
Gwenael G.R. Leday to
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/plrs
Branch: RELEASE_3_9
Last Commit: 85af8ce
Last Changed Date: 2019-05-02 11:53:39 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: plrs
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/plrs_1.24.0.tar.gz && rm -rf plrs.buildbin-libdir && mkdir plrs.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=plrs.buildbin-libdir plrs_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL plrs_1.24.0.zip && rm plrs_1.24.0.tar.gz plrs_1.24.0.zip
StartedAt: 2019-10-15 19:57:21 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:58:13 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 51.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/plrs_1.24.0.tar.gz && rm -rf plrs.buildbin-libdir && mkdir plrs.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=plrs.buildbin-libdir plrs_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL plrs_1.24.0.zip && rm plrs_1.24.0.tar.gz plrs_1.24.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100  467k  100  467k    0     0  7375k      0 --:--:-- --:--:-- --:--:-- 8342k

install for i386

* installing *source* package 'plrs' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'plrs'
    finding HTML links ... done
    criteria                                html  
    modify.conf                             html  
    neveCN17                                html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/neveCN17.Rd:15: file link 'cghCall' in package 'CGHbase' does not exist and so has been treated as a topic
    neveGE17                                html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/neveGE17.Rd:15: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
    plot-methods                            html  
    plrs-class                              html  
    plrs-package                            html  
    plrs                                    html  
    plrs.cb                                 html  
    plrs.select-class                       html  
    plrs.select                             html  
    plrs.series-class                       html  
    plrs.series                             html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:32: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:33: file link 'cghSeg' in package 'CGHbase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:33: file link 'cghCall' in package 'CGHbase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:47: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:48: file link 'cghSeg' in package 'CGHbase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:48: file link 'cghCall' in package 'CGHbase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp8uGrT4/R.INSTALL1e1c390a75b2/plrs/man/plrs.series.Rd:50: file link 'cghSeg' in package 'CGHbase' does not exist and so has been treated as a topic
    plrs.sim                                html  
    plrs.test                               html  
    predict.plrs                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'plrs' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'plrs' as plrs_1.24.0.zip
* DONE (plrs)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'plrs' successfully unpacked and MD5 sums checked