Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

BUILD BIN report for mzID on tokay2

This page was generated on 2019-10-16 12:28:32 -0400 (Wed, 16 Oct 2019).

Package 1079/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mzID 1.22.0
Laurent Gatto
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/mzID
Branch: RELEASE_3_9
Last Commit: 382d9cf
Last Changed Date: 2019-05-02 11:53:45 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mzID
Version: 1.22.0
Command: rm -rf mzID.buildbin-libdir && mkdir mzID.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mzID.buildbin-libdir mzID_1.22.0.tar.gz
StartedAt: 2019-10-16 09:45:31 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 09:46:18 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 46.7 seconds
RetCode: 0
Status:  OK  
PackageFile: mzID_1.22.0.zip
PackageFileSize: 783.7 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf mzID.buildbin-libdir && mkdir mzID.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mzID.buildbin-libdir mzID_1.22.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'mzID' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mzID'
    finding HTML links ... done
    flatten                                 html  
    increment                               html  
    keyFor                                  html  
    mzID-class                              html  
    mzID-getters                            html  
    mzID-package                            html  
    mzID                                    html  
    mzIDCollection-class                    html  
    mzIDCollection                          html  
    mzIDdatabase-class                      html  
    mzIDdatabase                            html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpwLuOzL/R.INSTALL1e8c631079c4/mzID/man/mzIDdatabase.Rd:11: file link 'xmlInternalTreeParse' in package 'XML' does not exist and so has been treated as a topic
    mzIDevidence-class                      html  
    mzIDevidence                            html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpwLuOzL/R.INSTALL1e8c631079c4/mzID/man/mzIDevidence.Rd:11: file link 'xmlInternalTreeParse' in package 'XML' does not exist and so has been treated as a topic
    mzIDparameters-class                    html  
    mzIDparameters                          html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpwLuOzL/R.INSTALL1e8c631079c4/mzID/man/mzIDparameters.Rd:11: file link 'xmlInternalTreeParse' in package 'XML' does not exist and so has been treated as a topic
    mzIDpeptides-class                      html  
    mzIDpeptides                            html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpwLuOzL/R.INSTALL1e8c631079c4/mzID/man/mzIDpeptides.Rd:11: file link 'xmlInternalTreeParse' in package 'XML' does not exist and so has been treated as a topic
    mzIDpsm-class                           html  
    mzIDpsm                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpwLuOzL/R.INSTALL1e8c631079c4/mzID/man/mzIDpsm.Rd:11: file link 'xmlInternalTreeParse' in package 'XML' does not exist and so has been treated as a topic
    removeDecoy                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'mzID' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mzID' as mzID_1.22.0.zip
* DONE (mzID)