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BUILD report for msa on tokay2

This page was generated on 2019-10-16 12:33:14 -0400 (Wed, 16 Oct 2019).

Package 1049/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
msa 1.16.0
Ulrich Bodenhofer
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/msa
Branch: RELEASE_3_9
Last Commit: be1cf21
Last Changed Date: 2019-05-02 11:53:55 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK [ OK ] OK  ERROR 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: msa
Version: 1.16.0
Command: chmod a+r msa -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data msa
StartedAt: 2019-10-15 23:26:06 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 23:36:51 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 644.4 seconds
RetCode: 0
Status:  OK  
PackageFile: msa_1.16.0.tar.gz
PackageFileSize: 3.603 MiB

Command output

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### Running command:
###
###   chmod a+r msa -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data msa
###
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* checking for file 'msa/DESCRIPTION' ... OK
* preparing 'msa':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup.win'
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* running 'cleanup.win'
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building 'msa_1.16.0.tar.gz'
Warning: file 'msa/cleanup' did not have execute permissions: corrected
Warning: file 'msa/src/ClustalOmega/configure' did not have execute permissions: corrected
Warning: file 'msa/src/ClustalW/configure' did not have execute permissions: corrected
Warning: file 'msa/src/gc-7.2/configure' did not have execute permissions: corrected
Warning: file 'msa/src/gc-7.2/libatomic_ops/configure' did not have execute permissions: corrected