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INSTALL report for mogsa on tokay2

This page was generated on 2019-10-16 12:32:56 -0400 (Wed, 16 Oct 2019).

Package 1034/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mogsa 1.18.1
Chen Meng
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/mogsa
Branch: RELEASE_3_9
Last Commit: db6fd0a
Last Changed Date: 2019-05-07 07:45:14 -0400 (Tue, 07 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mogsa
Version: 1.18.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/mogsa_1.18.1.tar.gz && rm -rf mogsa.buildbin-libdir && mkdir mogsa.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mogsa.buildbin-libdir mogsa_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL mogsa_1.18.1.zip && rm mogsa_1.18.1.tar.gz mogsa_1.18.1.zip
StartedAt: 2019-10-15 19:44:48 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:46:08 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 79.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/mogsa_1.18.1.tar.gz && rm -rf mogsa.buildbin-libdir && mkdir mogsa.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mogsa.buildbin-libdir mogsa_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL mogsa_1.18.1.zip && rm mogsa_1.18.1.tar.gz mogsa_1.18.1.zip
###
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100  295k  100  295k    0     0  2407k      0 --:--:-- --:--:-- --:--:-- 2549k

install for i386

* installing *source* package 'mogsa' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mogsa'
    finding HTML links ... done
    GIS                                     html  
    NCI60_4array_supdata                    html  
    NCI60_4arrays                           html  
    annotate.gs                             html  
    bootMbpca                               html  
    bootMbpcaK                              html  
    bootMoa                                 html  
    box.gs.feature                          html  
    combine-methods                         html  
    decompose.gs.group                      html  
    decompose.gs.ind                        html  
    deflat                                  html  
    distMoa                                 html  
    getmgsa                                 html  
    matpower                                html  
    mbpca                                   html  
    mgsa-class                              html  
    moGap                                   html  
    moa-class                               html  
    moa                                     html  
    moa.sup-class                           html  
    moaCoef                                 html  
    moaScore                                html  
    mogsa-package                           html  
    mogsa                                   html  
    msvd                                    html  
    nipalsSoftK                             html  
    pairwise.rv                             html  
    plot-methods                            html  
    plotGS                                  html  
    prepGraphite                            html  
    prepMsigDB                              html  
    prepSupMoa                              html  
    print-methods                           html  
    processOpt                              html  
    show-methods                            html  
    softK                                   html  
    summary-methods                         html  
    sup.moa                                 html  
    toMoa                                   html  
    wsvd                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'mogsa' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mogsa' as mogsa_1.18.1.zip
* DONE (mogsa)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'mogsa' successfully unpacked and MD5 sums checked