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INSTALL report for gwascat on tokay2

This page was generated on 2019-10-16 12:26:11 -0400 (Wed, 16 Oct 2019).

Package 736/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gwascat 2.16.1
VJ Carey
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/gwascat
Branch: RELEASE_3_9
Last Commit: 805b304
Last Changed Date: 2019-10-14 14:51:42 -0400 (Mon, 14 Oct 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: gwascat
Version: 2.16.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gwascat_2.16.1.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.16.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gwascat_2.16.1.zip && rm gwascat_2.16.1.tar.gz gwascat_2.16.1.zip
StartedAt: 2019-10-15 20:50:17 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:52:36 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 138.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gwascat_2.16.1.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.16.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gwascat_2.16.1.zip && rm gwascat_2.16.1.tar.gz gwascat_2.16.1.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 40 35.6M   40 14.5M    0     0  15.3M      0  0:00:02 --:--:--  0:00:02 15.4M
100 35.6M  100 35.6M    0     0  24.6M      0  0:00:01  0:00:01 --:--:-- 24.7M

install for i386

* installing *source* package 'gwascat' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gwascat'
    finding HTML links ... done
    bindcadd_snv                            html  
    gwascat-package                         html  
    gwastagger                              html  
    gwaswloc-class                          html  
    finding level-2 HTML links ... done

    gwcex2gviz                              html  
    gwdf_2012_02_02                         html  
    ldtagr                                  html  
    locon6                                  html  
    makeCurrentGwascat                      html  
    obo2graphNEL                            html  
    riskyAlleleCount                        html  
    topTraits                               html  
    traitsManh                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gwascat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gwascat' as gwascat_2.16.1.zip
* DONE (gwascat)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'gwascat' successfully unpacked and MD5 sums checked