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INSTALL report for gpart on tokay2

This page was generated on 2019-10-16 12:42:26 -0400 (Wed, 16 Oct 2019).

Package 705/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gpart 1.2.0
Sun Ah Kim
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/gpart
Branch: RELEASE_3_9
Last Commit: a01c201
Last Changed Date: 2019-05-02 11:54:13 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: gpart
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gpart_1.2.0.tar.gz && rm -rf gpart.buildbin-libdir && mkdir gpart.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpart.buildbin-libdir gpart_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gpart_1.2.0.zip && rm gpart_1.2.0.tar.gz gpart_1.2.0.zip
StartedAt: 2019-10-15 20:50:11 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:51:57 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 106.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gpart_1.2.0.tar.gz && rm -rf gpart.buildbin-libdir && mkdir gpart.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpart.buildbin-libdir gpart_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gpart_1.2.0.zip && rm gpart_1.2.0.tar.gz gpart_1.2.0.zip
###
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100  492k  100  492k    0     0  3715k      0 --:--:-- --:--:-- --:--:-- 3907k

install for i386

* installing *source* package 'gpart' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c gpart_cpp.cpp -o gpart_cpp.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o gpart.dll tmp.def RcppExports.o gpart_cpp.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/gpart.buildbin-libdir/00LOCK-gpart/00new/gpart/libs/i386
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gpart'
    finding HTML links ... done
    BigLD                                   html  
    CLQD                                    html  
    GPART                                   html  
    LDblockHeatmap                          html  
    SNPinfo                                 html  
    convert2GRange                          html  
    geneinfo                                html  
    geno                                    html  
    gpart-package                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gpart' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c gpart_cpp.cpp -o gpart_cpp.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o gpart.dll tmp.def RcppExports.o gpart_cpp.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/gpart.buildbin-libdir/gpart/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gpart' as gpart_1.2.0.zip
* DONE (gpart)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'gpart' successfully unpacked and MD5 sums checked