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INSTALL report for gaia on tokay2

This page was generated on 2019-10-16 12:24:28 -0400 (Wed, 16 Oct 2019).

Package 602/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gaia 2.28.0
S. Morganella
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/gaia
Branch: RELEASE_3_9
Last Commit: 93dd4bb
Last Changed Date: 2019-05-02 11:53:20 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: gaia
Version: 2.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gaia_2.28.0.tar.gz && rm -rf gaia.buildbin-libdir && mkdir gaia.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gaia.buildbin-libdir gaia_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gaia_2.28.0.zip && rm gaia_2.28.0.tar.gz gaia_2.28.0.zip
StartedAt: 2019-10-15 19:46:34 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:47:11 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 37.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gaia_2.28.0.tar.gz && rm -rf gaia.buildbin-libdir && mkdir gaia.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gaia.buildbin-libdir gaia_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gaia_2.28.0.zip && rm gaia_2.28.0.tar.gz gaia_2.28.0.zip
###
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100  455k  100  455k    0     0   492k      0 --:--:-- --:--:-- --:--:--  495k

install for i386

* installing *source* package 'gaia' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gaia'
    finding HTML links ... done
    crc                                     html  
    crc_markers                             html  
    gaia-package                            html  
    generate_approx_null_hypothesis         html  
    generate_null_hypothesis                html  
    load_cnv                                html  
    load_markers                            html  
    peel_off                                html  
    qvalue                                  html  
    runGAIA                                 html  
    search_peaks_in_regions                 html  
    synthCNV_Matrix                         html  
    synthMarkers_Matrix                     html  
    write_significant_regions               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gaia' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gaia' as gaia_2.28.0.zip
* DONE (gaia)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'gaia' successfully unpacked and MD5 sums checked