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BUILD BIN report for fCI on celaya2

This page was generated on 2019-10-16 12:55:54 -0400 (Wed, 16 Oct 2019).

Package 542/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fCI 1.14.0
Shaojun Tang
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/fCI
Branch: RELEASE_3_9
Last Commit: 4a3d86b
Last Changed Date: 2019-05-02 11:53:55 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: fCI
Version: 1.14.0
Command: rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh fCI_1.14.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R fCI.buildbin-libdir
StartedAt: 2019-10-16 08:34:41 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 08:35:03 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 22.3 seconds
RetCode: 0
Status:  OK 
PackageFile: fCI_1.14.0.tgz
PackageFileSize: 1.596 MiB

Command output

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### Running command:
###
###   rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh fCI_1.14.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R fCI.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=fCI.buildbin-libdir fCI_1.14.0.tar.gz'
>>>>>>> 

* installing *source* package ‘fCI’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning messages:
1: In rgl.init(initValue, onlyNULL) : RGL: GLX extension missing on server
2: 'rgl_init' failed, running with rgl.useNULL = TRUE 
in method for ‘initialize’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘normalization’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘setfCI’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘populate’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘find.fci.targets’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘show.targets’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘call.npci’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘compute’ with signature ‘"NPCI"’: no definition for class “NPCI”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** testing if installed package can be loaded from final location
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** testing if installed package keeps a record of temporary installation path
* DONE (fCI)