Back to Multiple platform build/check report for BioC 3.9
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

INSTALL report for epivizrData on tokay2

This page was generated on 2019-10-16 12:35:48 -0400 (Wed, 16 Oct 2019).

Package 513/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epivizrData 1.12.0
Hector Corrada Bravo
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/epivizrData
Branch: RELEASE_3_9
Last Commit: 06c4a28
Last Changed Date: 2019-05-02 11:54:02 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: epivizrData
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/epivizrData_1.12.0.tar.gz && rm -rf epivizrData.buildbin-libdir && mkdir epivizrData.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epivizrData.buildbin-libdir epivizrData_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL epivizrData_1.12.0.zip && rm epivizrData_1.12.0.tar.gz epivizrData_1.12.0.zip
StartedAt: 2019-10-15 20:45:17 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:46:18 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 61.4 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/epivizrData_1.12.0.tar.gz && rm -rf epivizrData.buildbin-libdir && mkdir epivizrData.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epivizrData.buildbin-libdir epivizrData_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL epivizrData_1.12.0.zip && rm epivizrData_1.12.0.tar.gz epivizrData_1.12.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 32774  100 32774    0     0   471k      0 --:--:-- --:--:-- --:--:--  524k

install for i386

* installing *source* package 'epivizrData' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'epivizrData'
    finding HTML links ... done
    EpivizBlockData-class                   html  
    finding level-2 HTML links ... done

    EpivizBpData-class                      html  
    EpivizData-class                        html  
    EpivizDataMgr-class                     html  
    EpivizFeatureData-class                 html  
    EpivizGeneInfoData-class                html  
    EpivizMeasurement-class                 html  
    ahToMySQL                               html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp657urQ/R.INSTALL232428f9502b/epivizrData/man/ahToMySQL.Rd:10: file link 'AnnotationHub' in package 'AnnotationHub' does not exist and so has been treated as a topic
    as.data.frame-EpivizData-method         html  
    as.list-EpivizMeasurement-method        html  
    createMgr                               html  
    epivizrData                             html  
    register                                html  
    show-EpivizMeasurement-method           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'epivizrData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'epivizrData' as epivizrData_1.12.0.zip
* DONE (epivizrData)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'epivizrData' successfully unpacked and MD5 sums checked