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INSTALL report for cnvGSA on tokay2

This page was generated on 2019-10-16 12:26:25 -0400 (Wed, 16 Oct 2019).

Package 309/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cnvGSA 1.28.0
Joseph Lugo
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/cnvGSA
Branch: RELEASE_3_9
Last Commit: efd8db4
Last Changed Date: 2019-05-02 11:53:35 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: cnvGSA
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cnvGSA_1.28.0.tar.gz && rm -rf cnvGSA.buildbin-libdir && mkdir cnvGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cnvGSA.buildbin-libdir cnvGSA_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cnvGSA_1.28.0.zip && rm cnvGSA_1.28.0.tar.gz cnvGSA_1.28.0.zip
StartedAt: 2019-10-15 19:58:00 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:58:39 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 39.1 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cnvGSA_1.28.0.tar.gz && rm -rf cnvGSA.buildbin-libdir && mkdir cnvGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cnvGSA.buildbin-libdir cnvGSA_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cnvGSA_1.28.0.zip && rm cnvGSA_1.28.0.tar.gz cnvGSA_1.28.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100  222k  100  222k    0     0  3454k      0 --:--:-- --:--:-- --:--:-- 3903k

install for i386

* installing *source* package 'cnvGSA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cnvGSA'
    finding HTML links ... done
    CnvGSAInput-class                       html  
    CnvGSAOutput-class                      html  
    cnvGSA-package                          html  
    cnvGSAIn                                html  
    cnvGSAgsTables                          html  
    cnvGSAlogRegTest                        html  
    f.enrFiles                              html  
    f.makeViz                               html  
    f.readConfig                            html  
** building package indices
** installing vignettes
   'cnvGSA-vignette.Rnw' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cnvGSA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cnvGSA' as cnvGSA_1.28.0.zip
* DONE (cnvGSA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'cnvGSA' successfully unpacked and MD5 sums checked