Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQRST[U]VWXYZ

BUILD report for UniProt.ws on tokay2

This page was generated on 2019-10-16 12:27:12 -0400 (Wed, 16 Oct 2019).

Package 1700/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UniProt.ws 2.24.2
Marc Carlson
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/UniProt.ws
Branch: RELEASE_3_9
Last Commit: 9aff5b8
Last Changed Date: 2019-10-08 13:33:03 -0400 (Tue, 08 Oct 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK [ ERROR ] skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 

Summary

Package: UniProt.ws
Version: 2.24.2
Command: chmod a+r UniProt.ws -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data UniProt.ws
StartedAt: 2019-10-15 22:27:49 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 22:33:07 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 317.8 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r UniProt.ws -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data UniProt.ws
###
##############################################################################
##############################################################################


* checking for file 'UniProt.ws/DESCRIPTION' ... OK
* preparing 'UniProt.ws':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'UniProt.ws.Rnw' using knitr
Quitting from lines 110-115 (UniProt.ws.Rnw) 
Error: processing vignette 'UniProt.ws.Rnw' failed with diagnostics:
attempt to set 'colnames' on an object with less than two dimensions
--- failed re-building 'UniProt.ws.Rnw'

SUMMARY: processing the following file failed:
  'UniProt.ws.Rnw'

Error: Vignette re-building failed.
Execution halted