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INSTALL report for TxRegInfra on tokay2

This page was generated on 2019-10-16 12:41:26 -0400 (Wed, 16 Oct 2019).

Package 1695/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TxRegInfra 1.4.0
VJ Carey
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/TxRegInfra
Branch: RELEASE_3_9
Last Commit: 9d6a5c6
Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TxRegInfra
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TxRegInfra_1.4.0.tar.gz && rm -rf TxRegInfra.buildbin-libdir && mkdir TxRegInfra.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TxRegInfra.buildbin-libdir TxRegInfra_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TxRegInfra_1.4.0.zip && rm TxRegInfra_1.4.0.tar.gz TxRegInfra_1.4.0.zip
StartedAt: 2019-10-15 20:19:19 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:20:45 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 86.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TxRegInfra_1.4.0.tar.gz && rm -rf TxRegInfra.buildbin-libdir && mkdir TxRegInfra.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TxRegInfra.buildbin-libdir TxRegInfra_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TxRegInfra_1.4.0.zip && rm TxRegInfra_1.4.0.tar.gz TxRegInfra_1.4.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0  355k    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  355k  100  355k    0     0  5568k      0 --:--:-- --:--:-- --:--:-- 6241k

install for i386

* installing *source* package 'TxRegInfra' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TxRegInfra'
    finding HTML links ... done
    RaggedMongoExpt                         html  
    URL_txregInAWS                          html  
    URL_txregLocal                          html  
    basicColData                            html  
    basicFormatter                          html  
    dgf_meta                                html  
    dnmeta                                  html  
    dnmetaApp                               html  
    getDocumentFields                       html  
    getFieldNames                           html  
    grConverter                             html  
    importBedToMongo                        html  
    listAllCollections                      html  
    makeAggregator                          html  
    makeColData                             html  
    makeGRConverterList                     html  
    oldbasicColData                         html  
    ragged41FP                              html  
    sbov                                    html  
    txmodels                                html  
    txregCollections                        html  
    verifyHasMongoCmd                       html  
    verifyRunningMongodb                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TxRegInfra' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TxRegInfra' as TxRegInfra_1.4.0.zip
* DONE (TxRegInfra)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'TxRegInfra' successfully unpacked and MD5 sums checked