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BUILD BIN report for TurboNorm on tokay2

This page was generated on 2019-10-16 12:24:33 -0400 (Wed, 16 Oct 2019).

Package 1688/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TurboNorm 1.32.0
Maarten van Iterson
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/TurboNorm
Branch: RELEASE_3_9
Last Commit: 186ddcb
Last Changed Date: 2019-05-02 11:53:20 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TurboNorm
Version: 1.32.0
Command: rm -rf TurboNorm.buildbin-libdir && mkdir TurboNorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TurboNorm.buildbin-libdir TurboNorm_1.32.0.tar.gz
StartedAt: 2019-10-16 10:24:28 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 10:25:26 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 57.3 seconds
RetCode: 0
Status:  OK  
PackageFile: TurboNorm_1.32.0.zip
PackageFileSize: 751.4 KiB

Command output

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### Running command:
###
###   rm -rf TurboNorm.buildbin-libdir && mkdir TurboNorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TurboNorm.buildbin-libdir TurboNorm_1.32.0.tar.gz
###
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install for i386

* installing *source* package 'TurboNorm' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o
Rinit.c:12:1: warning: missing braces around initializer [-Wmissing-braces]
 };
 ^
Rinit.c:12:1: warning: (near initialization for 'cMethods[2]') [-Wmissing-braces]
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c binners.c -o binners.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o TurboNorm.dll tmp.def Rinit.o binners.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/TurboNorm.buildbin-libdir/00LOCK-TurboNorm/00new/TurboNorm/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TurboNorm'
    finding HTML links ... done
    methylation                             html  
    normalize.pspline                       html  
    panel.pspline                           html  
    pspline                                 html  
    turbonorm-package                       html  
    turbotrend                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TurboNorm' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o
Rinit.c:12:1: warning: missing braces around initializer [-Wmissing-braces]
 };
 ^
Rinit.c:12:1: warning: (near initialization for 'cMethods[2]') [-Wmissing-braces]
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c binners.c -o binners.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o TurboNorm.dll tmp.def Rinit.o binners.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/TurboNorm.buildbin-libdir/TurboNorm/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TurboNorm' as TurboNorm_1.32.0.zip
* DONE (TurboNorm)