Douglas H Phanstiel
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/Sushi |
| Branch: RELEASE_3_9 |
| Last Commit: d251181 |
| Last Changed Date: 2019-05-02 11:53:47 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:29:49 -0400 (Wed, 16 Oct 2019).
| Package 1612/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Sushi 1.22.0 Douglas H Phanstiel
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: Sushi |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Sushi_1.22.0.tar.gz && rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sushi.buildbin-libdir Sushi_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Sushi_1.22.0.zip && rm Sushi_1.22.0.tar.gz Sushi_1.22.0.zip |
| StartedAt: 2019-10-15 19:48:35 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:50:06 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 90.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Sushi_1.22.0.tar.gz && rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sushi.buildbin-libdir Sushi_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Sushi_1.22.0.zip && rm Sushi_1.22.0.tar.gz Sushi_1.22.0.zip
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install for i386
* installing *source* package 'Sushi' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Sushi'
finding HTML links ... done
SushiColors html
Sushi_5C.bedpe html
Sushi_ChIAPET_pol2.bedpe html
Sushi_ChIPExo_CTCF.bedgraph html
Sushi_ChIPSeq_CTCF.bedgraph html
Sushi_ChIPSeq_pol2.bed html
Sushi_ChIPSeq_pol2.bedgraph html
Sushi_ChIPSeq_severalfactors.bed html
Sushi_DNaseI.bedgraph html
Sushi_GWAS.bed html
Sushi_HiC.matrix html
Sushi_RNASeq_K562.bedgraph html
Sushi_genes.bed html
Sushi_hg18_genome html
Sushi_transcripts.bed html
addlegend html
chromOffsets html
convertstrandinfo html
labelgenome html
labelplot html
maptocolors html
maptolwd html
opaque html
plotBed html
plotBedgraph html
plotBedpe html
plotGenes html
finding level-2 HTML links ... done
plotHic html
plotManhattan html
sortChrom html
zoombox html
zoomsregion html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Sushi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Sushi' as Sushi_1.22.0.zip
* DONE (Sushi)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'Sushi' successfully unpacked and MD5 sums checked