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INSTALL report for SCnorm on tokay2

This page was generated on 2019-10-16 12:38:58 -0400 (Wed, 16 Oct 2019).

Package 1472/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SCnorm 1.6.0
Rhonda Bacher
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/SCnorm
Branch: RELEASE_3_9
Last Commit: f12f68f
Last Changed Date: 2019-05-02 11:54:07 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SCnorm
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SCnorm_1.6.0.tar.gz && rm -rf SCnorm.buildbin-libdir && mkdir SCnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCnorm.buildbin-libdir SCnorm_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SCnorm_1.6.0.zip && rm SCnorm_1.6.0.tar.gz SCnorm_1.6.0.zip
StartedAt: 2019-10-15 21:08:30 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 21:09:27 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 56.8 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SCnorm_1.6.0.tar.gz && rm -rf SCnorm.buildbin-libdir && mkdir SCnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCnorm.buildbin-libdir SCnorm_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SCnorm_1.6.0.zip && rm SCnorm_1.6.0.tar.gz SCnorm_1.6.0.zip
###
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100 2714k  100 2714k    0     0  26.9M      0 --:--:-- --:--:-- --:--:-- 28.8M

install for i386

* installing *source* package 'SCnorm' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SCnorm'
    finding HTML links ... done
    ExampleSimSCData                        html  
    GetTD                                   html  
    SCnorm                                  html  
    SCnormFit                               html  
    correctWithin                           html  
    evaluateK                               html  
    generateEvalPlot                        html  
    getCounts                               html  
    getDens                                 html  
    getSlopes                               html  
    normWrapper                             html  
    plotCountDepth                          html  
    plotWithinFactor                        html  
    quickReg                                html  
    redoBox                                 html  
    results                                 html  
    scaleNormMultCont                       html  
    splitGroups                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SCnorm' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SCnorm' as SCnorm_1.6.0.zip
* DONE (SCnorm)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'SCnorm' successfully unpacked and MD5 sums checked