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INSTALL report for SCAN.UPC on tokay2

This page was generated on 2019-10-16 12:26:59 -0400 (Wed, 16 Oct 2019).

Package 1460/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SCAN.UPC 2.26.0
Stephen R. Piccolo
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/SCAN.UPC
Branch: RELEASE_3_9
Last Commit: a91b021
Last Changed Date: 2019-05-02 11:53:38 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SCAN.UPC
Version: 2.26.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SCAN.UPC_2.26.0.tar.gz && rm -rf SCAN.UPC.buildbin-libdir && mkdir SCAN.UPC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCAN.UPC.buildbin-libdir SCAN.UPC_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SCAN.UPC_2.26.0.zip && rm SCAN.UPC_2.26.0.tar.gz SCAN.UPC_2.26.0.zip
StartedAt: 2019-10-15 20:16:28 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:17:20 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 52.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SCAN.UPC_2.26.0.tar.gz && rm -rf SCAN.UPC.buildbin-libdir && mkdir SCAN.UPC.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCAN.UPC.buildbin-libdir SCAN.UPC_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SCAN.UPC_2.26.0.zip && rm SCAN.UPC_2.26.0.tar.gz SCAN.UPC_2.26.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  274k  100  274k    0     0  4193k      0 --:--:-- --:--:-- --:--:-- 4644k

install for i386

* installing *source* package 'SCAN.UPC' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load and register a 'foreach' adaptor
        Example - Using 'multicore' for 2 cores:
             library(doMC)
             registerDoMC(2)
================================================================================
** help
*** installing help indices
  converting help for package 'SCAN.UPC'
    finding HTML links ... done
    BatchAdjust                             html  
    BatchAdjustFromFile                     html  
    InstallBrainArrayPackage                html  
    ParseMetaFromGtfFile                    html  
    SCAN                                    html  
    SCAN_TwoColor                           html  
    UPC_Generic                             html  
    UPC_Generic_ExpressionSet               html  
    UPC_RNASeq                              html  
    UPC_RNASeq_Single                       html  
    UPC_TwoColor                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load and register a 'foreach' adaptor
        Example - Using 'multicore' for 2 cores:
             library(doMC)
             registerDoMC(2)
================================================================================
** testing if installed package can be loaded from final location
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load and register a 'foreach' adaptor
        Example - Using 'multicore' for 2 cores:
             library(doMC)
             registerDoMC(2)
================================================================================
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SCAN.UPC' ...
** testing if installed package can be loaded
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load and register a 'foreach' adaptor
        Example - Using 'multicore' for 2 cores:
             library(doMC)
             registerDoMC(2)
================================================================================
* MD5 sums
packaged installation of 'SCAN.UPC' as SCAN.UPC_2.26.0.zip
* DONE (SCAN.UPC)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'SCAN.UPC' successfully unpacked and MD5 sums checked