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BUILD report for RcwlPipelines on malbec2

This page was generated on 2019-10-16 12:17:39 -0400 (Wed, 16 Oct 2019).

Package 1333/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RcwlPipelines 1.0.11
Qiang Hu
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/RcwlPipelines
Branch: RELEASE_3_9
Last Commit: 8d69bb2
Last Changed Date: 2019-09-04 16:37:50 -0400 (Wed, 04 Sep 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK [ OK ] OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  ERROR  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: RcwlPipelines
Version: 1.0.11
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RcwlPipelines
StartedAt: 2019-10-15 23:25:39 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 23:26:17 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 37.5 seconds
RetCode: 0
Status:  OK 
PackageFile: RcwlPipelines_1.0.11.tar.gz
PackageFileSize: 1.031 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RcwlPipelines
###
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* checking for file ‘RcwlPipelines/DESCRIPTION’ ... OK
* preparing ‘RcwlPipelines’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘RcwlPipelines_1.0.11.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘RcwlPipelines/inst/GATK4/gatk4-data-processing/processing-for-variant-discovery-gatk4.b37.wgs.inputs.json’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘RcwlPipelines/inst/GATK4/gatk4-data-processing/processing-for-variant-discovery-gatk4.hg38.wgs.inputs.json’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘RcwlPipelines/inst/GATK4/gatk4-data-processing/processing-for-variant-discovery-gatk4.hg38.wgs.inputs.local.json’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘RcwlPipelines/inst/GATK4/gatk4-germline-snps-indels/haplotypecaller-gvcf-gatk4.hg38.inputs.local.json’