Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

BUILD BIN report for REDseq on tokay2

This page was generated on 2019-10-16 12:25:09 -0400 (Wed, 16 Oct 2019).

Package 1348/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
REDseq 1.30.0
Lihua Julie Zhu
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/REDseq
Branch: RELEASE_3_9
Last Commit: 901a101
Last Changed Date: 2019-05-02 11:53:26 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: REDseq
Version: 1.30.0
Command: rm -rf REDseq.buildbin-libdir && mkdir REDseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=REDseq.buildbin-libdir REDseq_1.30.0.tar.gz
StartedAt: 2019-10-16 10:02:46 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 10:03:34 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 48.7 seconds
RetCode: 0
Status:  OK  
PackageFile: REDseq_1.30.0.zip
PackageFileSize: 241.7 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf REDseq.buildbin-libdir && mkdir REDseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=REDseq.buildbin-libdir REDseq_1.30.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'REDseq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq'
** help
*** installing help indices
  converting help for package 'REDseq'
    finding HTML links ... done
    REDseq-package                          html  
    assignSeq2REsite                        html  
    binom.test.REDseq                       html  
    buildREmap                              html  
    compareREDseq                           html  
    distanceHistSeq2RE                      html  
    example.REDseq                          html  
    example.assignedREDseq                  html  
    example.map                             html  
    plotCutDistribution                     html  
    searchPattern                           html  
    summarizeByRE                           html  
    summarizeBySeq                          html  
    writeHits                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq'
** testing if installed package can be loaded from final location
No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'REDseq' ...
** testing if installed package can be loaded
No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq'
* MD5 sums
packaged installation of 'REDseq' as REDseq_1.30.0.zip
* DONE (REDseq)