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INSTALL report for PWMEnrich on tokay2

This page was generated on 2019-10-16 12:26:35 -0400 (Wed, 16 Oct 2019).

Package 1280/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PWMEnrich 4.20.0
Robert Stojnic
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/PWMEnrich
Branch: RELEASE_3_9
Last Commit: ab13907
Last Changed Date: 2019-05-02 11:53:36 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: PWMEnrich
Version: 4.20.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PWMEnrich_4.20.0.tar.gz && rm -rf PWMEnrich.buildbin-libdir && mkdir PWMEnrich.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PWMEnrich.buildbin-libdir PWMEnrich_4.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PWMEnrich_4.20.0.zip && rm PWMEnrich_4.20.0.tar.gz PWMEnrich_4.20.0.zip
StartedAt: 2019-10-15 19:37:14 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:38:42 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 87.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PWMEnrich_4.20.0.tar.gz && rm -rf PWMEnrich.buildbin-libdir && mkdir PWMEnrich.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PWMEnrich.buildbin-libdir PWMEnrich_4.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PWMEnrich_4.20.0.zip && rm PWMEnrich_4.20.0.tar.gz PWMEnrich_4.20.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3482k  100 3482k    0     0  32.1M      0 --:--:-- --:--:-- --:--:-- 34.3M

install for i386

* installing *source* package 'PWMEnrich' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PWMEnrich'
    finding HTML links ... done
    MotifEnrichmentReport                   html  
    MotifEnrichmentResults                  html  
    PFMtoPWM                                html  
    PWM                                     html  
    PWMCutoffBackground                     html  
    PWMEmpiricalBackground                  html  
    PWMGEVBackground                        html  
    PWMLognBackground                       html  
    PWMUnscaled                             html  
    as.data.frame-commaMotifEnrichmentReport-method
                                            html  
    getBackgroundFrequencies                html  
    groupReport-commaMotifEnrichmentResults-method
                                            html  
    makeBackground                          html  
    makePWMCutoffBackground                 html  
    makePWMEmpiricalBackground              html  
    makePWMGEVBackground                    html  
    makePWMLognBackground                   html  
    makePWMPvalCutoffBackground             html  
    makePWMPvalCutoffBackgroundFromSeq      html  
    makePriors                              html  
    motifDiffEnrichment                     html  
    motifEcdf                               html  
    motifEnrichment                         html  
    motifIC                                 html  
    motifRankingForGroup-commaMotifEnrichmentResults-method
                                            html  
    motifRankingForSequence-commaMotifEnrichmentResults-method
                                            html  
    motifScores                             html  
    motifSimilarity                         html  
    operators-MotifEnrichmentReport         html  
    operators-MotifEnrichmentResults        html  
    operators-PWM                           html  
    operators-PWMCutoffBackground           html  
    operators-PWMEmpiricalBackground        html  
    operators-PWMGEVBackground              html  
    operators-PWMLognBackground             html  
    plot                                    html  
    plotMotifScores                         html  
    plotMultipleMotifs                      html  
    plotTopMotifsGroup-commaMotifEnrichmentResults-method
                                            html  
    plotTopMotifsSequence-commaMotifEnrichmentResults-method
                                            html  
    readMotifs                              html  
    registerCoresPWMEnrich                  html  
    reverseComplement                       html  
    scanWithPWM                             html  
    seqLogoGrid                             html  
    sequenceReport-commaMotifEnrichmentResults-method
                                            html  
    subsetting-PWMCutoffBackground          html  
    subsetting-PWMEmpiricalBackground       html  
    subsetting-PWMGEVBackground             html  
    subsetting-PWMLognBackground            html  
    toPWM                                   html  
    useBigMemoryPWMEnrich                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PWMEnrich' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PWMEnrich' as PWMEnrich_4.20.0.zip
* DONE (PWMEnrich)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'PWMEnrich' successfully unpacked and MD5 sums checked